Detailed information NTG0600505

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NDQ70_RS09515
• Genome accession: NZ_CP098534
• Coordinates: 1792432..1793685 (-)
• Length: 417 a.a.
• NCBI ID: WP_047919725.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10525
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1787432..1798685

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDQ70_RS12130	-	1787547..1787985 (-)	439	Protein_1830	hypothetical protein	-
NDQ70_RS09485 (NDQ70_09255)	-	1788246..1788617 (+)	372	Protein_1831	pilin	-
NDQ70_RS09495 (NDQ70_09265)	lpxC	1789331..1790254 (+)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
NDQ70_RS09500 (NDQ70_09270)	-	1790382..1790800 (+)	419	Protein_1833	pilin	-
NDQ70_RS09505 (NDQ70_09275)	-	1791341..1792162 (+)	822	WP_263589027.1	opacity family porin	-
NDQ70_RS09510 (NDQ70_09280)	-	1792176..1792316 (+)	141	WP_184949629.1	hypothetical protein	-
NDQ70_RS09515 (NDQ70_09285)	pilA	1792432..1793685 (-)	1254	WP_047919725.1	signal recognition particle-docking protein FtsY	Machinery gene
NDQ70_RS09520 (NDQ70_09290)	msrAB	1793831..1795399 (+)	1569	WP_260247250.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
NDQ70_RS09525 (NDQ70_09295)	-	1795483..1795965 (-)	483	WP_003694396.1	CinA family protein	-
NDQ70_RS09530 (NDQ70_09300)	-	1795992..1796840 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
NDQ70_RS09535 (NDQ70_09305)	-	1796934..1797935 (-)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44359.71 Da
• Isoelectric Point: 4.8123

>NTDB_id=600505 NDQ70_RS09515 WP_047919725.1 1792432..1793685(-) (pilA) [Neisseria gonorrhoeae strain 10525]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTAGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=600505 NDQ70_RS09515 WP_047919725.1 1792432..1793685(-) (pilA) [Neisseria gonorrhoeae strain 10525]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCAGGCGATACTTTCCGCGCCGCCGCGCGCGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTGACCGTGATTTCACAAACTGCGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CGAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATCATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.52	100	0.995