Detailed information NTG0600476

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: BAJP3042_RS17095
• Genome accession: NZ_CP082243
• Coordinates: 3526450..3527139 (-)
• Length: 229 a.a.
• NCBI ID: WP_222836125.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain JP3042
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3521450..3532139

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAJP3042_RS17060 (BAJP3042_17060)	fliW	3521541..3521972 (-)	432	WP_007407475.1	flagellar assembly protein FliW	-
BAJP3042_RS17065 (BAJP3042_17065)	-	3522002..3522571 (-)	570	WP_222835404.1	DUF6470 family protein	-
BAJP3042_RS17070 (BAJP3042_17070)	flgL	3522662..3523579 (-)	918	WP_007407477.1	flagellar hook-associated protein FlgL	-
BAJP3042_RS17075 (BAJP3042_17075)	flgK	3523591..3525108 (-)	1518	WP_032869556.1	flagellar hook-associated protein FlgK	-
BAJP3042_RS17080 (BAJP3042_17080)	-	3525124..3525606 (-)	483	WP_003151394.1	flagellar protein FlgN	-
BAJP3042_RS17085 (BAJP3042_17085)	flgM	3525621..3525887 (-)	267	WP_003151393.1	flagellar biosynthesis anti-sigma factor FlgM	-
BAJP3042_RS17090 (BAJP3042_17090)	-	3525957..3526376 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
BAJP3042_RS17095 (BAJP3042_17095)	comFC	3526450..3527139 (-)	690	WP_222836125.1	phosphoribosyltransferase family protein	Machinery gene
BAJP3042_RS17100 (BAJP3042_17100)	-	3527145..3527429 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
BAJP3042_RS17105 (BAJP3042_17105)	comFA	3527487..3528872 (-)	1386	WP_222835405.1	DEAD/DEAH box helicase	Machinery gene
BAJP3042_RS17110 (BAJP3042_17110)	-	3528980..3529828 (-)	849	WP_063094272.1	DegV family protein	-
BAJP3042_RS17115 (BAJP3042_17115)	degU	3529926..3530615 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BAJP3042_RS17120 (BAJP3042_17120)	degS	3530692..3531855 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 25335.93 Da
• Isoelectric Point: 7.8200

>NTDB_id=600476 BAJP3042_RS17095 WP_222836125.1 3526450..3527139(-) (comFC) [Bacillus amyloliquefaciens strain JP3042]
MNCLLCDSSISSSLTWRSLFSLAPEQEICSICSSQFEKIEGPVCSICGRPQESNEKCADCAARESKTEKRFLLRQNRSVY
LYNDAMKDSLARFKFRGDAKIIQPFERDFAAGFKAAYPSNTHTLIPIPLSGERLAERGFNQSEMLASLLGMPVISPLIRL
NNEKQSKKSKTDRLSAEKKFSADENSAEGMNVILIDDIYTTGATLHQAAEVLLTVGKASSVSSFTLIRS

Nucleotide

• Length: 690 bp

>NTDB_id=600476 BAJP3042_RS17095 WP_222836125.1 3526450..3527139(-) (comFC) [Bacillus amyloliquefaciens strain JP3042]
CTGAATTGTTTATTGTGTGACTCATCAATTTCAAGTTCATTGACTTGGAGATCTCTGTTTTCTCTGGCGCCCGAGCAAGA
GATATGCAGCATATGCAGCAGCCAATTCGAAAAAATTGAAGGCCCCGTATGCAGTATATGCGGGAGGCCTCAGGAGTCAA
ATGAAAAATGCGCTGATTGTGCGGCACGGGAATCAAAAACGGAAAAGCGCTTTTTGCTGCGGCAAAACCGTTCGGTATAT
TTATATAATGATGCGATGAAGGACTCATTGGCCCGTTTTAAATTCAGGGGTGATGCGAAAATCATTCAACCATTTGAACG
TGACTTTGCTGCCGGCTTTAAAGCGGCATATCCATCAAATACACATACTCTCATCCCTATTCCGCTGAGCGGCGAACGGC
TGGCGGAACGCGGATTCAATCAATCCGAGATGCTGGCCTCTCTGCTCGGAATGCCCGTCATTTCCCCCCTCATCCGACTG
AACAACGAAAAACAATCCAAAAAGAGCAAAACAGACAGGCTGTCTGCAGAAAAAAAGTTTTCAGCAGACGAAAACTCCGC
CGAAGGTATGAACGTCATTTTAATAGATGATATTTATACGACGGGCGCCACACTTCACCAAGCCGCCGAAGTCCTGCTGA
CAGTGGGTAAAGCGTCATCAGTCTCCTCTTTTACTTTAATCAGGAGCTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (167-227)

• Double zinc ribbon domain (DZR_2) (2-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	59.031	99.127	0.585