Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | J450_RS05525 | Genome accession | NC_021738 |
| Coordinates | 1145193..1145531 (+) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica D171 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1140193..1150531
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J450_RS05500 (J450_05430) | rpsL | 1140435..1140809 (-) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
| J450_RS05505 (J450_05435) | rfaC | 1140930..1141889 (-) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| J450_RS05510 (J450_05445) | waaF | 1141957..1142994 (-) | 1038 | WP_020824266.1 | lipopolysaccharide heptosyltransferase II | - |
| J450_RS05515 (J450_05450) | - | 1143105..1143521 (-) | 417 | WP_020824267.1 | MliC family protein | - |
| J450_RS05520 (J450_05455) | - | 1143581..1144900 (-) | 1320 | WP_006251645.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| J450_RS05525 (J450_05460) | comEA/comE1 | 1145193..1145531 (+) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| J450_RS05530 (J450_05465) | asd | 1145696..1146589 (+) | 894 | WP_006251643.1 | archaetidylserine decarboxylase | - |
| J450_RS05535 (J450_05470) | hsdR | 1146661..1149012 (+) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| J450_RS05540 (J450_05475) | - | 1149060..1150529 (+) | 1470 | WP_006251642.1 | class I SAM-dependent DNA methyltransferase | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=59799 J450_RS05525 WP_006251644.1 1145193..1145531(+) (comEA/comE1) [Mannheimia haemolytica D171]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=59799 J450_RS05525 WP_006251644.1 1145193..1145531(+) (comEA/comE1) [Mannheimia haemolytica D171]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |