Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   BJAB0715_RS17735 Genome accession   NC_021733
Coordinates   3687885..3688412 (-) Length   175 a.a.
NCBI ID   WP_000695065.1    Uniprot ID   N9K1N5
Organism   Acinetobacter baumannii BJAB0715     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3682885..3693412
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJAB0715_RS17715 (BJAB0715_03544) - 3683074..3683949 (-) 876 WP_020753498.1 hypothetical protein -
  BJAB0715_RS17720 (BJAB0715_03545) aroB 3683965..3685047 (-) 1083 WP_020753499.1 3-dehydroquinate synthase -
  BJAB0715_RS17725 (BJAB0715_03546) aroK 3685076..3685645 (-) 570 WP_000643712.1 shikimate kinase AroK -
  BJAB0715_RS17730 (BJAB0715_03547) pilQ 3685657..3687822 (-) 2166 WP_001017033.1 type IV pilus secretin PilQ family protein Machinery gene
  BJAB0715_RS17735 (BJAB0715_03548) pilP 3687885..3688412 (-) 528 WP_000695065.1 pilus assembly protein PilP Machinery gene
  BJAB0715_RS17740 (BJAB0715_03549) pilO 3688423..3689163 (-) 741 WP_000076099.1 type 4a pilus biogenesis protein PilO Machinery gene
  BJAB0715_RS17745 (BJAB0715_03550) pilN 3689160..3689801 (-) 642 WP_020753500.1 PilN domain-containing protein Machinery gene
  BJAB0715_RS17750 (BJAB0715_03551) pilM 3689801..3690859 (-) 1059 WP_038346731.1 pilus assembly protein PilM Machinery gene

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19419.64 Da        Isoelectric Point: 8.9898

>NTDB_id=59784 BJAB0715_RS17735 WP_000695065.1 3687885..3688412(-) (pilP) [Acinetobacter baumannii BJAB0715]
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=59784 BJAB0715_RS17735 WP_000695065.1 3687885..3688412(-) (pilP) [Acinetobacter baumannii BJAB0715]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGCAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GCATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCGGATGGTCGAGAAGGC
TATGTCGAAAGACCGAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(27-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9K1N5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

100

100

1
  comL Acinetobacter baylyi ADP1

71.839

99.429

0.714

Multiple sequence alignment