Detailed information NTG0597056

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: K5J94_RS04210
• Genome accession: NZ_CP081502
• Coordinates: 874227..875153 (+)
• Length: 308 a.a.
• NCBI ID: WP_159542918.1
• Uniprot ID: -
• Organism: Streptococcus halichoeri strain Shali_VAS-CPH
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 869227..880153

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5J94_RS04200	amiA3	870684..872660 (+)	1977	WP_221913625.1	peptide ABC transporter substrate-binding protein	Regulator
K5J94_RS04205	amiC	872728..874227 (+)	1500	WP_159542921.1	ABC transporter permease	Regulator
K5J94_RS04210	amiD	874227..875153 (+)	927	WP_159542918.1	oligopeptide ABC transporter permease OppC	Regulator
K5J94_RS04215	amiE	875162..876232 (+)	1071	WP_221913627.1	ABC transporter ATP-binding protein	Regulator
K5J94_RS04220	amiF	876225..877160 (+)	936	WP_221913628.1	ATP-binding cassette domain-containing protein	Regulator
K5J94_RS04225	-	877625..878791 (+)	1167	WP_221913630.1	PTS sugar transporter subunit IIC	-
K5J94_RS04230	-	878784..879635 (+)	852	WP_159564117.1	alpha/beta hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34514.27 Da
• Isoelectric Point: 7.8981

>NTDB_id=597056 K5J94_RS04210 WP_159542918.1 874227..875153(+) (amiD) [Streptococcus halichoeri strain Shali_VAS-CPH]
MAEIDKKKFEFVELDSYASEVIDAPSYSYWKSVFRQFFSRKSTVFMLVILTAIILMSFIYPMFANYDFGDVSNINDFGKR
YISPNADYWFGTDKNGQSLFDGVWYGARNSILISVIATAINMVIGVVVGGLWGVSKTVDKVMIEIYNIISNLPQMLIIIV
LTYSIGAGFWNLIFAFCVTGWIGIAYAVRVQVLRYRDLEYNLASQTLGTPTYKVVSKNLLPQLVSVIVSMVSLLLPAYIS
SEAFLSFFGLGLPLSQPSLGRLISNYSSNLTTNAYLFWIPLTTLILVSLPLYIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=597056 K5J94_RS04210 WP_159542918.1 874227..875153(+) (amiD) [Streptococcus halichoeri strain Shali_VAS-CPH]
ATGGCTGAGATTGATAAAAAGAAGTTTGAATTTGTCGAACTAGATAGTTATGCATCAGAAGTCATTGATGCCCCTTCTTA
TTCCTACTGGAAATCTGTTTTCCGCCAGTTTTTCTCACGGAAATCAACGGTCTTTATGCTTGTTATTTTGACCGCCATTA
TTTTAATGAGTTTCATTTATCCCATGTTTGCCAATTATGACTTTGGGGATGTTTCCAACATTAACGACTTTGGCAAACGG
TATATTTCACCCAACGCTGACTATTGGTTTGGGACTGATAAGAACGGCCAGTCTTTATTTGATGGTGTTTGGTATGGAGC
GCGCAACTCCATCTTGATTTCAGTAATTGCAACAGCGATTAATATGGTCATTGGTGTTGTGGTTGGTGGACTTTGGGGTG
TTTCTAAGACAGTCGATAAGGTCATGATTGAAATCTACAATATTATTTCCAATCTACCTCAAATGTTGATTATCATTGTC
CTCACCTATTCTATCGGTGCAGGGTTTTGGAACCTGATTTTTGCTTTTTGTGTGACCGGTTGGATTGGTATCGCTTACGC
AGTGCGCGTGCAAGTGCTGCGTTATCGGGATTTAGAATATAATCTTGCTAGTCAGACCCTGGGCACACCAACTTATAAAG
TAGTTAGTAAGAATCTCCTGCCACAATTGGTTTCTGTTATTGTATCGATGGTCTCACTCTTGTTGCCAGCCTACATTTCA
TCTGAAGCCTTCTTGTCATTCTTTGGCCTTGGTTTGCCCTTATCTCAGCCAAGTTTGGGACGGTTGATTTCTAACTACTC
TTCAAATTTAACGACAAATGCTTATCTCTTTTGGATTCCGCTTACGACGCTTATCTTAGTTTCTCTCCCACTATACATTG
TGGGACAAAACTTAGCTGATGCAAGTGACCCAAGAACTCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	74.351	100	0.744
amiD	Streptococcus thermophilus LMG 18311	73.377	100	0.734
amiD	Streptococcus thermophilus LMD-9	73.377	100	0.734