Detailed information NTG0596650

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: M9H69_RS08740
• Genome accession: NZ_CP097843
• Coordinates: 1739572..1740570 (-)
• Length: 332 a.a.
• NCBI ID: WP_284453896.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain HP01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1734572..1745570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M9H69_RS08720 (M9H69_08720)	eeP	1735954..1737210 (-)	1257	WP_250315414.1	RIP metalloprotease RseP	Regulator
M9H69_RS08725 (M9H69_08725)	-	1737226..1738029 (-)	804	WP_250315415.1	phosphatidate cytidylyltransferase	-
M9H69_RS08730 (M9H69_08730)	-	1738038..1738796 (-)	759	WP_250315416.1	isoprenyl transferase	-
M9H69_RS08735 (M9H69_08735)	-	1739007..1739591 (-)	585	WP_250315417.1	nucleotidyltransferase family protein	-
M9H69_RS08740 (M9H69_08740)	ruvB	1739572..1740570 (-)	999	WP_284453896.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
M9H69_RS08745 (M9H69_08745)	-	1740858..1743269 (-)	2412	WP_250315418.1	flavocytochrome c	-
M9H69_RS08750 (M9H69_08750)	-	1743295..1743903 (-)	609	WP_250315419.1	NADPH-dependent FMN reductase	-
M9H69_RS08755 (M9H69_08755)	-	1744122..1745321 (+)	1200	WP_250315420.1	OFA family MFS transporter	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37303.83 Da
• Isoelectric Point: 4.5734

>NTDB_id=596650 M9H69_RS08740 WP_284453896.1 1739572..1740570(-) (ruvB) [Streptococcus oralis strain HP01]
MSRILDYEIMGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAGEGSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEMKITHEAAAELALRSRGTPRIANRLLKRVRDFAQIMGNGLID
DVITDKALTMLDVDHEGLDYVDQKILRTMIEMYGGGPIGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATAK
AYEHLGYEYNEK

Nucleotide

• Length: 999 bp

>NTDB_id=596650 M9H69_RS08740 WP_284453896.1 1739572..1740570(-) (ruvB) [Streptococcus oralis strain HP01]
ATGAGTAGAATTTTAGATTATGAAATCATGGGTGATGAGGAGTTGGTAGAACGTACCCTACGTCCCCAATATTTACGTGA
ATATATTGGGCAGGATAAGGTCAAGGACCAGCTCCAAATCTTTATCGAAGCCGCCAAAATGCGGGATGAAGCACTGGATC
ATGTACTCTTATTTGGGCCTCCAGGTTTGGGGAAAACGACCATGGCCTTTGTTATTGCCAACGAACTGGGAGTCAATCTC
AAGCAGACCTCTGGGCCTGTCATTGAAAAAGCGGGTGACTTGGTAGCGATTTTGAATGATTTGGAACCTGGAGACGTCCT
CTTTATTGACGAGATTCATCGCCTGCCCATGTCGGTGGAAGAGGTACTTTATAGTGCCATGGAGGACTTTTACATCGACA
TCATGATTGGGGCTGGTGAAGGCAGTCGCAGTGTCCATTTGGATTTGCCACCTTTTACCTTGATTGGTGCGACGACCCGT
GCTGGTATGCTTTCTAATCCTCTACGAGCGCGTTTCGGGATTACAGGTCATATGGAATACTATGCCCATGCTGACTTGAC
AGAAATTGTCGAACGAACAGCAGATATTTTTGAGATGAAAATCACTCATGAGGCAGCTGCTGAGCTGGCCTTACGCAGTC
GAGGAACTCCTCGTATCGCCAATCGTCTCCTTAAGCGCGTGCGCGACTTTGCCCAGATTATGGGGAATGGTTTAATTGAT
GATGTCATTACTGATAAGGCTTTGACCATGCTAGATGTAGACCATGAAGGGTTAGACTATGTGGACCAGAAAATCCTTCG
GACCATGATTGAGATGTACGGTGGTGGTCCTATCGGATTAGGAACTCTCTCTGTCAATATTGCCGAGGAGCGCGAAACGG
TGGAAGATATGTATGAGCCTTACTTAATCCAAAAAGGTTTTATCATGCGGACACGATCTGGACGGGTTGCGACGGCTAAG
GCATATGAACATTTAGGTTATGAATACAATGAAAAATGA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	97.289	100	0.973
ruvB	Streptococcus pneumoniae R6	96.988	100	0.97
ruvB	Streptococcus pneumoniae D39	96.988	100	0.97
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.123	98.193	0.59
ruvB	Helicobacter pylori 26695	51.084	97.289	0.497
ruvB	Synechocystis sp. PCC 6803	49.84	94.277	0.47