Detailed information NTG0596042

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: K5B69_RS02070
• Genome accession: NZ_CP081346
• Coordinates: 446305..447453 (+)
• Length: 382 a.a.
• NCBI ID: WP_003100959.1
• Uniprot ID: G3XCX3
• Organism: Pseudomonas aeruginosa strain SE5419
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 441305..452453

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5B69_RS02045 (K5B69_02045)	-	442456..442752 (-)	297	WP_031628111.1	DUF167 domain-containing protein	-
K5B69_RS02050 (K5B69_02050)	-	442749..443342 (-)	594	WP_003084544.1	YggT family protein	-
K5B69_RS02055 (K5B69_02055)	proC	443353..444174 (-)	822	WP_003084546.1	pyrroline-5-carboxylate reductase	-
K5B69_RS02060 (K5B69_02060)	-	444186..444878 (-)	693	WP_003118803.1	YggS family pyridoxal phosphate-dependent enzyme	-
K5B69_RS02065 (K5B69_02065)	pilT	445093..446127 (+)	1035	WP_003084552.1	type IV pilus twitching motility protein PilT	Machinery gene
K5B69_RS02070 (K5B69_02070)	pilU	446305..447453 (+)	1149	WP_003100959.1	type IV pilus ATPase PilU	Machinery gene
K5B69_RS02075 (K5B69_02075)	czcD	447461..448360 (-)	900	WP_003100957.1	CDF family zinc transporter CzcD	-
K5B69_RS02080 (K5B69_02080)	-	448515..448919 (+)	405	WP_003084560.1	NINE protein	-
K5B69_RS02085 (K5B69_02085)	-	449162..450535 (+)	1374	WP_179063077.1	pyridoxal-phosphate dependent enzyme	-
K5B69_RS02090 (K5B69_02090)	-	450532..451716 (+)	1185	WP_003117897.1	cystathionine gamma-synthase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 42532.81 Da
• Isoelectric Point: 6.7792

>NTDB_id=596042 K5B69_RS02070 WP_003100959.1 446305..447453(+) (pilU) [Pseudomonas aeruginosa strain SE5419]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED
PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI
IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVHELKPLMKRSTEQGMQTFDQA
LYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSSLTQGLSLEITDDDPAGRRFR

Nucleotide

• Length: 1149 bp

>NTDB_id=596042 K5B69_RS02070 WP_003100959.1 446305..447453(+) (pilU) [Pseudomonas aeruginosa strain SE5419]
ATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATCACCGCCGGCGTACCGCCGTC
GATGAAGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCG
TGATGAACGAGCAGCAGCGCCGCGATTTCGCCGAGAACCATGAGTGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGGGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTATTGCGCCGGATCGAGACCAACATCCCGACCCTGGA
AGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAACTCCACCGGGCACATCATCTCCATCGAGGAC
CCGATCGAGTACATCCACCAGCACCAGGGCTGCATCGTCACCCAGCGCGAGGTGGGGCTGGACACCGACTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCACG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGCACGCGAACAACGCCAACCAGGCGCTGGAGCGGATC
ATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTGCACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCG
CTGTACCAGCTCTACACCCAGGGCGAGATCACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGCCT
GATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAGCCTGACCCAGGGCCTGAGCCTGGAAATCACCGACG
ACGACCCTGCCGGCCGGCGCTTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (111-270)

3D structure

• AlphaFold DB: G3XCX3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	88.482	100	0.885
pilU	Acinetobacter baylyi ADP1	65.266	93.455	0.61
pilU	Vibrio cholerae strain A1552	60.286	91.623	0.552
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	88.743	0.382