Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PSYCG_RS10940 Genome accession   NC_021661
Coordinates   2609307..2609684 (-) Length   125 a.a.
NCBI ID   WP_011514416.1    Uniprot ID   A0A1U6GPZ7
Organism   Psychrobacter sp. G     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2604307..2614684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSYCG_RS10920 (PSYCG_11350) - 2605556..2606524 (-) 969 WP_020444250.1 CheR family methyltransferase -
  PSYCG_RS10925 (PSYCG_11355) - 2606714..2607718 (-) 1005 Protein_2172 methyl-accepting chemotaxis protein -
  PSYCG_RS10930 (PSYCG_11360) - 2608245..2608775 (-) 531 WP_020444252.1 chemotaxis protein CheW -
  PSYCG_RS10935 (PSYCG_11365) - 2608779..2609141 (-) 363 WP_011514415.1 response regulator -
  PSYCG_RS10940 (PSYCG_11375) pilG 2609307..2609684 (-) 378 WP_011514416.1 twitching motility response regulator PilG Regulator
  PSYCG_RS10945 (PSYCG_11380) - 2610344..2611555 (+) 1212 WP_041772647.1 efflux RND transporter periplasmic adaptor subunit -
  PSYCG_RS10950 (PSYCG_11385) - 2611838..2612560 (+) 723 WP_011514418.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14050.14 Da        Isoelectric Point: 4.7289

>NTDB_id=59438 PSYCG_RS10940 WP_011514416.1 2609307..2609684(-) (pilG) [Psychrobacter sp. G]
MENNFDGLKVMVIDDSKTIRRTAETLLQKAGCEVVTAIDGFDALAKIVDHNPDIIFVDIMMPRLDGYQTCALIKNNPDYA
SKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFEAINQYR

Nucleotide


Download         Length: 378 bp        

>NTDB_id=59438 PSYCG_RS10940 WP_011514416.1 2609307..2609684(-) (pilG) [Psychrobacter sp. G]
ATGGAAAATAATTTTGATGGTTTAAAAGTAATGGTTATTGATGACTCAAAAACCATTCGCCGTACCGCAGAAACCTTGCT
GCAAAAAGCGGGCTGTGAAGTTGTCACTGCCATTGATGGATTTGATGCCTTGGCTAAGATTGTCGATCATAATCCAGATA
TTATTTTTGTGGATATCATGATGCCACGTTTGGACGGTTATCAAACTTGTGCCTTGATTAAAAATAACCCTGACTATGCC
AGTAAACCTGTGATTATGTTGTCATCTAAAGATGGTTTATTTGATAAAGCCCGTGGACGTATTGTAGGTTCTGATGAATA
TCTGACCAAACCGTTTAGTAAGGATGAGCTTTTTGAGGCAATTAATCAGTATCGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1U6GPZ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.419

99.2

0.768
  vicR Streptococcus mutans UA159

40.517

92.8

0.376
  micA Streptococcus pneumoniae Cp1015

42.202

87.2

0.368
  pilH Synechocystis sp. PCC 6803

40.351

91.2

0.368

Multiple sequence alignment