Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BSA_RS08695 | Genome accession | NC_021485 |
| Coordinates | 1726728..1727219 (-) | Length | 163 a.a. |
| NCBI ID | WP_000609586.1 | Uniprot ID | A0AAD2WUV1 |
| Organism | Streptococcus agalactiae 09mas018883 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1721728..1732219
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSA_RS08680 (BSA_17650) | - | 1724634..1725305 (-) | 672 | WP_000174844.1 | DUF1129 family protein | - |
| BSA_RS08685 (BSA_17660) | - | 1725330..1726274 (-) | 945 | WP_000812124.1 | magnesium transporter CorA family protein | - |
| BSA_RS08690 (BSA_17670) | rpsR | 1726444..1726683 (-) | 240 | WP_000068665.1 | 30S ribosomal protein S18 | - |
| BSA_RS08695 (BSA_17680) | ssb | 1726728..1727219 (-) | 492 | WP_000609586.1 | single-stranded DNA-binding protein | Machinery gene |
| BSA_RS08700 (BSA_17690) | rpsF | 1727231..1727518 (-) | 288 | WP_001151773.1 | 30S ribosomal protein S6 | - |
| BSA_RS08705 (BSA_17700) | mutY | 1728581..1729735 (+) | 1155 | WP_016480119.1 | A/G-specific adenine glycosylase | - |
| BSA_RS08710 (BSA_17710) | - | 1729912..1730505 (+) | 594 | WP_000402392.1 | helix-turn-helix transcriptional regulator | - |
| BSA_RS08715 (BSA_17720) | trxA | 1730551..1730883 (-) | 333 | WP_001932060.1 | thioredoxin | - |
| BSA_RS08720 (BSA_17730) | - | 1730946..1731446 (-) | 501 | WP_000446806.1 | phosphatase PAP2 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18155.77 Da Isoelectric Point: 4.9119
>NTDB_id=59083 BSA_RS08695 WP_000609586.1 1726728..1727219(-) (ssb) [Streptococcus agalactiae 09mas018883]
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSSNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSSNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=59083 BSA_RS08695 WP_000609586.1 1726728..1727219(-) (ssb) [Streptococcus agalactiae 09mas018883]
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACACGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCATCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACGCCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACACGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCATCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACGCCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
60.465 |
100 |
0.638 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.286 |
100 |
0.626 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.963 |
66.871 |
0.374 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
65.031 |
0.368 |