Detailed information NTG0058983

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: FGCSD_RS00715
• Genome accession: NZ_AP018726
• Coordinates: 131360..132358 (+)
• Length: 332 a.a.
• NCBI ID: WP_129555156.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain Kdys0611
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 126360..137358

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGCSD_RS00695 (FGCSD_0105)	purK	126706..127779 (+)	1074	WP_129555153.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
FGCSD_RS00700 (FGCSD_0106)	-	127790..128518 (+)	729	WP_129555154.1	hypothetical protein	-
FGCSD_RS00705 (FGCSD_0108)	purB	128779..130071 (+)	1293	WP_022554088.1	adenylosuccinate lyase	-
FGCSD_RS00710 (FGCSD_0109)	comR	130214..131125 (+)	912	WP_129555155.1	XRE family transcriptional regulator	Regulator
FGCSD_RS00715 (FGCSD_0111)	ruvB	131360..132358 (+)	999	WP_129555156.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
FGCSD_RS00720 (FGCSD_0112)	-	132493..132927 (+)	435	WP_129555157.1	low molecular weight protein-tyrosine-phosphatase	-
FGCSD_RS00725 (FGCSD_0113)	-	132953..133354 (+)	402	WP_003049089.1	MORN repeat-containing protein	-
FGCSD_RS00730 (FGCSD_0114)	-	133351..135126 (+)	1776	WP_129555158.1	acyltransferase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37250.62 Da
• Isoelectric Point: 4.5106

>NTDB_id=58983 FGCSD_RS00715 WP_129555156.1 131360..132358(+) (ruvB) [Streptococcus dysgalactiae strain Kdys0611]
MARILDNDVMGDEELVERTLRPQYLREYIGQDKVKEQLTIFIEAAKLRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKAGDLVAILNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGAGDTSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYQEADLTEIVERTADIFDMEIVHEAAQELACRSRGTPRIANRLLKRVRDYAQIVGDGVIT
AQITDKALTMLDVDREGLDYVDQKILRTMIEMYQGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFLMRTRTGRVATEK
AYRHLGYSYPSN

Nucleotide

• Length: 999 bp

>NTDB_id=58983 FGCSD_RS00715 WP_129555156.1 131360..132358(+) (ruvB) [Streptococcus dysgalactiae strain Kdys0611]
ATGGCTAGAATTTTAGATAATGATGTAATGGGGGATGAAGAGCTTGTTGAGCGAACGCTTCGTCCGCAGTATTTACGTGA
GTACATTGGGCAAGATAAGGTTAAGGAACAATTAACCATTTTTATTGAAGCGGCTAAGCTCCGTGATGAATCTTTAGATC
ATGTGTTGTTGTTTGGCCCTCCAGGTTTAGGGAAAACCACAATGGCATTTGTGATTGCTAATGAATTAGGGGTTAACTTG
AAGCAAACTTCAGGACCAGCGATTGAGAAGGCTGGTGATTTGGTAGCTATTTTGAATGATCTTGAACCAGGAGATGTGCT
CTTTATTGATGAAATTCATCGTCTGCCTATGGCAGTCGAAGAAGTATTGTACAGTGCTATGGAAGATTTTTACATCGACA
TTATGATTGGTGCTGGGGACACTAGTCGAAGTGTTCATTTGGATTTGCCACCTTTTACATTGATTGGAGCTACAACGCGA
GCTGGGATGTTATCAAATCCTTTGCGAGCTCGATTTGGCATTACTGGACACATGGAGTATTATCAGGAAGCTGATTTGAC
TGAAATTGTCGAACGAACAGCCGATATTTTTGACATGGAAATTGTTCACGAAGCGGCTCAAGAGTTAGCTTGCCGTAGTC
GGGGAACACCGCGTATTGCTAATAGGTTGTTAAAGCGGGTACGTGATTATGCTCAGATTGTTGGAGATGGCGTCATCACG
GCTCAGATTACAGACAAAGCCCTAACCATGCTTGATGTTGATCGAGAAGGTCTTGATTATGTAGATCAGAAGATTTTACG
CACCATGATTGAAATGTATCAGGGTGGACCTGTTGGCTTAGGCACTTTATCAGTTAATATTGCAGAAGAACGTGATACAG
TTGAAGACATGTACGAACCTTATCTGATTCAAAAAGGATTTCTAATGCGTACACGAACTGGTCGTGTGGCTACGGAAAAA
GCCTATCGTCATCTTGGTTATTCATATCCGTCTAACTAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	90.274	99.096	0.895
ruvB	Streptococcus pneumoniae R6	89.97	99.096	0.892
ruvB	Streptococcus pneumoniae D39	89.97	99.096	0.892
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.061	98.795	0.593
ruvB	Helicobacter pylori 26695	50.774	97.289	0.494
ruvB	Synechocystis sp. PCC 6803	50	95.783	0.479