Detailed information NTG0589770

Bioinformatically predicted

Overview

• Name: micB
• Type: Regulator
• Locus tag: LPB404_RS07665
• Genome accession: NZ_CP079821
• Coordinates: 1515008..1516354 (-)
• Length: 448 a.a.
• NCBI ID: WP_125374346.1
• Uniprot ID: -
• Organism: Streptococcus rubneri strain LPB0404
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1510008..1521354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPB404_RS07650 (LPB404_07650)	rnc	1512729..1513430 (-)	702	WP_125374528.1	ribonuclease III	-
LPB404_RS07655 (LPB404_07655)	-	1513589..1513978 (-)	390	WP_373689705.1	YbaN family protein	-
LPB404_RS07660 (LPB404_07660)	vicX	1514190..1514999 (-)	810	WP_023023917.1	MBL fold metallo-hydrolase	Regulator
LPB404_RS07665 (LPB404_07665)	micB	1515008..1516354 (-)	1347	WP_125374346.1	cell wall metabolism sensor histidine kinase VicK	Regulator
LPB404_RS07670 (LPB404_07670)	micA	1516347..1517048 (-)	702	WP_125374347.1	response regulator YycF	Regulator
LPB404_RS07675 (LPB404_07675)	-	1517623..1518672 (+)	1050	WP_023023923.1	DUF389 domain-containing protein	-
LPB404_RS07680 (LPB404_07680)	thrS	1519032..1520975 (-)	1944	WP_023023925.1	threonine--tRNA ligase	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 50773.09 Da
• Isoelectric Point: 4.5931

>NTDB_id=589770 LPB404_RS07665 WP_125374346.1 1515008..1516354(-) (micB) [Streptococcus rubneri strain LPB0404]
MINHIKEVMTSYNFVFILLTLGFIIVVALLILENRRDNMKLRLLNDKIKSLIAGEYSDIIDLQGGPELTEISNSINDLSE
VIRLTHENLEQETKRLTSILSYMTDGVLATNRRGQIILVNEMAAKQLNVVVEEVMNISILDLLGISEEYELRDLITNVPE
LTIDSQDENGEYISLRVRFALIRRESGFISGLVAVLHDTTEQDKEERERRLFVSNVSHELRTPLTSVKSYLEALDDGAIS
EPVAPEFVKVSLTETNRMMRMVTDLLSLSRIDNETSQLDVELTNFTAFITFILNRFDKMKNQAGEKKYDIVRDYPISPVW
VEIDTDKMTQVLDNILNNAIKYSPDGGEIRVGMKTTDAQLIISISDEGLGIPKKDLPRIFDRFYRVDKARSRAQGGTGLG
LAIAKEIIKQHKGFIWAKSEYGKGSTFTIVLPYDKDAILDDGWDNEGE

Nucleotide

• Length: 1347 bp

>NTDB_id=589770 LPB404_RS07665 WP_125374346.1 1515008..1516354(-) (micB) [Streptococcus rubneri strain LPB0404]
ATGATTAATCACATCAAAGAAGTCATGACCTCTTATAATTTTGTTTTTATATTACTCACTCTTGGATTTATTATCGTGGT
GGCCTTGCTGATTCTAGAAAATCGTCGGGATAACATGAAGCTACGCCTGTTGAATGATAAAATTAAGAGTTTGATTGCTG
GAGAATATTCAGATATTATTGATTTACAAGGAGGTCCTGAATTGACAGAGATTTCCAACAGTATCAATGATTTATCAGAA
GTTATCCGTTTGACGCATGAAAATTTGGAGCAAGAAACCAAGCGCTTGACCAGTATTCTTTCCTATATGACAGATGGGGT
TTTAGCGACCAATCGTCGTGGGCAGATTATCCTAGTCAATGAAATGGCTGCCAAACAACTTAATGTCGTGGTCGAAGAGG
TCATGAACATCAGTATTCTGGATTTGCTTGGTATTAGTGAAGAGTATGAACTGCGAGACTTGATTACCAATGTTCCAGAA
TTGACGATCGATTCGCAGGATGAAAATGGGGAGTACATCTCTTTACGGGTTCGCTTCGCCTTGATTCGGAGAGAATCTGG
TTTTATTTCTGGTCTAGTTGCCGTTTTGCATGACACAACCGAACAGGACAAGGAAGAGCGGGAACGTCGTTTATTCGTAT
CCAACGTTAGTCATGAACTCCGAACCCCACTGACCAGTGTCAAATCCTACTTGGAGGCCTTGGATGACGGAGCGATTTCC
GAGCCAGTTGCACCGGAATTTGTTAAAGTATCTTTGACAGAGACCAACCGGATGATGCGGATGGTGACGGATTTATTGAG
TCTTTCACGGATCGATAATGAAACCAGTCAATTAGATGTTGAATTGACTAACTTTACAGCCTTTATCACCTTCATTTTGA
ACCGCTTCGATAAGATGAAGAACCAGGCTGGAGAGAAGAAATATGATATTGTTCGTGATTATCCTATTTCTCCTGTCTGG
GTTGAAATTGACACAGATAAGATGACGCAGGTTTTAGACAATATCTTAAATAACGCTATTAAATATTCCCCAGATGGTGG
GGAAATTCGTGTGGGGATGAAAACAACGGATGCCCAGTTGATTATTTCGATTTCAGATGAGGGATTAGGGATTCCTAAAA
AGGACCTTCCTCGTATTTTTGACCGCTTTTATCGCGTGGATAAGGCACGTAGTCGCGCCCAGGGTGGGACTGGTTTAGGA
CTTGCCATTGCGAAGGAAATTATCAAGCAGCACAAAGGATTTATTTGGGCCAAGAGTGAATATGGAAAAGGTTCTACTTT
CACGATTGTTCTACCATATGATAAAGATGCTATCCTGGATGATGGATGGGATAATGAAGGTGAATAA

Domains

Predicted by InterproScan.

• PAS fold (PAS) (96-198)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (324-434)

• His Kinase A (phospho-acceptor) domain (HisKA) (209-273)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
micB	Streptococcus pneumoniae Cp1015	77.854	97.768	0.761
vicK	Streptococcus mutans UA159	70.69	90.625	0.641