Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | LP6_RS04690 | Genome accession | NC_021350 |
| Coordinates | 1010277..1010876 (+) | Length | 199 a.a. |
| NCBI ID | WP_014841277.1 | Uniprot ID | A0AAV2UVV9 |
| Organism | Legionella pneumophila subsp. pneumophila str. Thunder Bay | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1005277..1015876
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP6_RS04675 (LP6_0914) | ravI | 1007220..1008230 (-) | 1011 | WP_010946661.1 | Dot/Icm T4SS effector RavI | - |
| LP6_RS04680 (LP6_0915) | pilM | 1008647..1009711 (+) | 1065 | WP_010946662.1 | type IV pilus assembly protein PilM | Machinery gene |
| LP6_RS04685 (LP6_0916) | pilN | 1009715..1010263 (+) | 549 | WP_010946663.1 | PilN domain-containing protein | Machinery gene |
| LP6_RS04690 (LP6_0917) | pilO | 1010277..1010876 (+) | 600 | WP_014841277.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LP6_RS04695 (LP6_0918) | pilP | 1010873..1011460 (+) | 588 | WP_010946665.1 | pilus assembly protein PilP | Machinery gene |
| LP6_RS04700 (LP6_0919) | pilQ | 1011464..1013560 (+) | 2097 | WP_010946666.1 | type IV pilus secretin PilQ | Machinery gene |
| LP6_RS04705 (LP6_0920) | aroK | 1014012..1014533 (+) | 522 | WP_027219629.1 | shikimate kinase AroK | - |
| LP6_RS04710 (LP6_0921) | aroB | 1014520..1015629 (+) | 1110 | WP_010946668.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22496.21 Da Isoelectric Point: 5.3369
>NTDB_id=58914 LP6_RS04690 WP_014841277.1 1010277..1010876(+) (pilO) [Legionella pneumophila subsp. pneumophila str. Thunder Bay]
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=58914 LP6_RS04690 WP_014841277.1 1010277..1010876(+) (pilO) [Legionella pneumophila subsp. pneumophila str. Thunder Bay]
ATGGACACGGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGTATCAGTATACTGATAATTGGATTAGGGTATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCAGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCATCCGGAGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
ATGGACACGGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGTATCAGTATACTGATAATTGGATTAGGGTATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCAGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCATCCGGAGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
99.497 |
100 |
0.995 |
| comO | Acinetobacter baylyi ADP1 |
39.894 |
94.472 |
0.377 |
| pilO | Acinetobacter baumannii D1279779 |
37.696 |
95.98 |
0.362 |