Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | LP6_RS04685 | Genome accession | NC_021350 |
| Coordinates | 1009715..1010263 (+) | Length | 182 a.a. |
| NCBI ID | WP_010946663.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila str. Thunder Bay | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1004715..1015263
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP6_RS04675 (LP6_0914) | ravI | 1007220..1008230 (-) | 1011 | WP_010946661.1 | Dot/Icm T4SS effector RavI | - |
| LP6_RS04680 (LP6_0915) | pilM | 1008647..1009711 (+) | 1065 | WP_010946662.1 | type IV pilus assembly protein PilM | Machinery gene |
| LP6_RS04685 (LP6_0916) | pilN | 1009715..1010263 (+) | 549 | WP_010946663.1 | PilN domain-containing protein | Machinery gene |
| LP6_RS04690 (LP6_0917) | pilO | 1010277..1010876 (+) | 600 | WP_014841277.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LP6_RS04695 (LP6_0918) | pilP | 1010873..1011460 (+) | 588 | WP_010946665.1 | pilus assembly protein PilP | Machinery gene |
| LP6_RS04700 (LP6_0919) | pilQ | 1011464..1013560 (+) | 2097 | WP_010946666.1 | type IV pilus secretin PilQ | Machinery gene |
| LP6_RS04705 (LP6_0920) | aroK | 1014012..1014533 (+) | 522 | WP_027219629.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 182 a.a. Molecular weight: 21267.04 Da Isoelectric Point: 10.1404
>NTDB_id=58913 LP6_RS04685 WP_010946663.1 1009715..1010263(+) (pilN) [Legionella pneumophila subsp. pneumophila str. Thunder Bay]
MTEINLLPWREQKREQEKKLFTTMLLIGIIIAAAIVFLMNSYVSHLISNQMNRNQILQKEITALDEQIKEIKALKQIREG
LISRMSIVQNLQSTRTLMVHLFDELIKITPPGVYITKMQREHDVVTLWGYSESNTSISILMRNIEANVWIQNPVLTEIKK
NVEKKQSPNNEFKLSFVLKPKY
MTEINLLPWREQKREQEKKLFTTMLLIGIIIAAAIVFLMNSYVSHLISNQMNRNQILQKEITALDEQIKEIKALKQIREG
LISRMSIVQNLQSTRTLMVHLFDELIKITPPGVYITKMQREHDVVTLWGYSESNTSISILMRNIEANVWIQNPVLTEIKK
NVEKKQSPNNEFKLSFVLKPKY
Nucleotide
Download Length: 549 bp
>NTDB_id=58913 LP6_RS04685 WP_010946663.1 1009715..1010263(+) (pilN) [Legionella pneumophila subsp. pneumophila str. Thunder Bay]
ATGACTGAAATTAATTTATTGCCATGGCGTGAACAAAAACGTGAGCAGGAAAAGAAATTATTTACAACCATGCTATTGAT
AGGAATTATCATCGCTGCAGCAATTGTTTTTTTAATGAACTCTTATGTTTCTCATTTAATAAGTAATCAAATGAACCGAA
ATCAGATTTTACAAAAAGAAATTACAGCTTTAGATGAACAGATCAAGGAGATTAAAGCATTAAAACAAATCAGGGAAGGT
TTGATTTCAAGAATGTCGATTGTGCAGAATCTGCAGTCAACAAGAACTTTAATGGTTCACTTATTTGATGAATTAATAAA
AATTACTCCTCCAGGAGTTTACATAACCAAGATGCAAAGAGAACACGATGTAGTAACACTCTGGGGGTATTCCGAATCGA
ATACAAGTATTTCTATTTTGATGAGAAATATAGAGGCTAATGTCTGGATACAGAACCCTGTTCTAACTGAAATTAAAAAA
AATGTTGAAAAAAAACAGTCTCCAAACAATGAATTTAAATTAAGTTTTGTGCTTAAACCCAAATATTAG
ATGACTGAAATTAATTTATTGCCATGGCGTGAACAAAAACGTGAGCAGGAAAAGAAATTATTTACAACCATGCTATTGAT
AGGAATTATCATCGCTGCAGCAATTGTTTTTTTAATGAACTCTTATGTTTCTCATTTAATAAGTAATCAAATGAACCGAA
ATCAGATTTTACAAAAAGAAATTACAGCTTTAGATGAACAGATCAAGGAGATTAAAGCATTAAAACAAATCAGGGAAGGT
TTGATTTCAAGAATGTCGATTGTGCAGAATCTGCAGTCAACAAGAACTTTAATGGTTCACTTATTTGATGAATTAATAAA
AATTACTCCTCCAGGAGTTTACATAACCAAGATGCAAAGAGAACACGATGTAGTAACACTCTGGGGGTATTCCGAATCGA
ATACAAGTATTTCTATTTTGATGAGAAATATAGAGGCTAATGTCTGGATACAGAACCCTGTTCTAACTGAAATTAAAAAA
AATGTTGAAAAAAAACAGTCTCCAAACAATGAATTTAAATTAAGTTTTGTGCTTAAACCCAAATATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
99.451 |
100 |
0.995 |