Detailed information NTG0588936

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: KXY09_RS17555
• Genome accession: NZ_CP079719
• Coordinates: 3548671..3549834 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain LABIM44
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3543671..3554834

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KXY09_RS17525 (KXY09_17515)	-	3543936..3544355 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
KXY09_RS17530 (KXY09_17520)	comFC	3544429..3545118 (-)	690	WP_219152091.1	phosphoribosyltransferase family protein	Machinery gene
KXY09_RS17535 (KXY09_17525)	-	3545124..3545408 (-)	285	WP_007407481.1	late competence development ComFB family protein	-
KXY09_RS17540 (KXY09_17530)	comFA	3545466..3546851 (-)	1386	WP_168984791.1	DEAD/DEAH box helicase	Machinery gene
KXY09_RS17545 (KXY09_17535)	-	3546959..3547807 (-)	849	WP_007614105.1	DegV family protein	-
KXY09_RS17550 (KXY09_17540)	degU	3547905..3548594 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
KXY09_RS17555 (KXY09_17545)	degS	3548671..3549834 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
KXY09_RS17560 (KXY09_17550)	-	3550057..3550704 (+)	648	WP_007614107.1	YigZ family protein	-
KXY09_RS17565 (KXY09_17555)	-	3550709..3551890 (+)	1182	WP_168984790.1	LCP family protein	-
KXY09_RS17570 (KXY09_17560)	-	3551989..3553065 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
KXY09_RS17575 (KXY09_17565)	-	3553198..3554394 (-)	1197	WP_063094274.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=588936 KXY09_RS17555 WP_007407484.1 3548671..3549834(-) (degS) [Bacillus velezensis strain LABIM44]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=588936 KXY09_RS17555 WP_007407484.1 3548671..3549834(-) (degS) [Bacillus velezensis strain LABIM44]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTAGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951