Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | KYE71_RS09855 | Genome accession | NZ_CP079231 |
| Coordinates | 1121747..1121968 (+) | Length | 73 a.a. |
| NCBI ID | WP_404802223.1 | Uniprot ID | - |
| Organism | Bifidobacterium pseudocatenulatum strain YIT12820 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1116747..1126968
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYE71_RS04760 (KYE71_04755) | - | 1117242..1117991 (-) | 750 | WP_065435332.1 | YdcF family protein | - |
| KYE71_RS04765 (KYE71_04760) | - | 1118176..1118889 (+) | 714 | WP_022245152.1 | GNAT family N-acetyltransferase | - |
| KYE71_RS04770 (KYE71_04765) | - | 1119633..1120403 (+) | 771 | WP_081291364.1 | thioredoxin domain-containing protein | - |
| KYE71_RS04775 (KYE71_04770) | - | 1120408..1121313 (+) | 906 | WP_171842652.1 | ABC transporter transmembrane domain-containing protein | - |
| KYE71_RS09720 (KYE71_04775) | - | 1121316..1121681 (+) | 366 | WP_065435292.1 | ATP-binding cassette domain-containing protein | - |
| KYE71_RS09855 (KYE71_04780) | rcrQ | 1121747..1121968 (+) | 222 | WP_404802223.1 | ATP-binding cassette domain-containing protein | Regulator |
| KYE71_RS04785 (KYE71_04785) | - | 1121980..1123527 (+) | 1548 | WP_141670963.1 | lanthionine synthetase C family protein | - |
| KYE71_RS04790 (KYE71_04790) | - | 1123650..1124288 (+) | 639 | WP_236716000.1 | response regulator transcription factor | - |
| KYE71_RS04795 (KYE71_04795) | - | 1124359..1125456 (+) | 1098 | WP_134862788.1 | histidine kinase | - |
| KYE71_RS04800 (KYE71_04800) | - | 1125876..1126067 (-) | 192 | WP_162472321.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 73 a.a. Molecular weight: 8335.68 Da Isoelectric Point: 8.0509
>NTDB_id=588324 KYE71_RS09855 WP_404802223.1 1121747..1121968(+) (rcrQ) [Bifidobacterium pseudocatenulatum strain YIT12820]
MSLSGGQRQRLQIARACLRKAPILILDEATSNLDVKTERRVLDNLLRSHEYDISIVISHRLSTIIDSDVIFFI
MSLSGGQRQRLQIARACLRKAPILILDEATSNLDVKTERRVLDNLLRSHEYDISIVISHRLSTIIDSDVIFFI
Nucleotide
Download Length: 222 bp
>NTDB_id=588324 KYE71_RS09855 WP_404802223.1 1121747..1121968(+) (rcrQ) [Bifidobacterium pseudocatenulatum strain YIT12820]
ATGTCTTTGTCTGGTGGACAGCGACAGAGATTGCAGATTGCGAGAGCTTGTTTAAGGAAAGCTCCGATACTTATTTTGGA
TGAGGCAACGTCGAATCTTGATGTGAAGACAGAAAGACGTGTGCTTGATAACCTATTAAGATCGCATGAGTATGATATTT
CAATTGTCATTTCACATCGCTTGTCTACGATAATAGACTCAGACGTTATTTTCTTTATTTGA
ATGTCTTTGTCTGGTGGACAGCGACAGAGATTGCAGATTGCGAGAGCTTGTTTAAGGAAAGCTCCGATACTTATTTTGGA
TGAGGCAACGTCGAATCTTGATGTGAAGACAGAAAGACGTGTGCTTGATAACCTATTAAGATCGCATGAGTATGATATTT
CAATTGTCATTTCACATCGCTTGTCTACGATAATAGACTCAGACGTTATTTTCTTTATTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
51.316 |
100 |
0.534 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
56.452 |
84.932 |
0.479 |
| comA | Streptococcus mitis SK321 |
58.333 |
82.192 |
0.479 |
| comA | Streptococcus pneumoniae Rx1 |
56.667 |
82.192 |
0.466 |
| comA | Streptococcus pneumoniae D39 |
56.667 |
82.192 |
0.466 |
| comA | Streptococcus pneumoniae R6 |
56.667 |
82.192 |
0.466 |
| comA/nlmT | Streptococcus mutans UA159 |
55.738 |
83.562 |
0.466 |
| comA | Streptococcus mitis NCTC 12261 |
55.738 |
83.562 |
0.466 |
| comA | Streptococcus pneumoniae TIGR4 |
55.738 |
83.562 |
0.466 |
| rcrP | Streptococcus mutans UA159 |
43.056 |
98.63 |
0.425 |
| amiE | Streptococcus thermophilus LMG 18311 |
42.188 |
87.671 |
0.37 |
| amiE | Streptococcus thermophilus LMD-9 |
42.188 |
87.671 |
0.37 |
| amiE | Streptococcus salivarius strain HSISS4 |
42.188 |
87.671 |
0.37 |