Detailed information NTG0058764

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: SA27298_RS00395
• Genome accession: NZ_AP018548
• Coordinates: 64417..65415 (+)
• Length: 332 a.a.
• NCBI ID: WP_003032066.1
• Uniprot ID: -
• Organism: Streptococcus anginosus strain CCUG 27928
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 59417..70415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SA27298_RS00370 (SA27298_0074)	-	59565..60392 (+)	828	WP_003032057.1	PTS system mannose/fructose/sorbose family transporter subunit IID	-
SA27298_RS00375 (SA27298_0075)	-	60410..60814 (+)	405	WP_003032047.1	PTS sugar transporter subunit IIA	-
SA27298_RS00380 (SA27298_0076)	-	60981..62150 (+)	1170	WP_003032051.1	SIS domain-containing protein	-
SA27298_RS00385 (SA27298_0077)	lacD	62161..63162 (+)	1002	WP_003032053.1	tagatose-bisphosphate aldolase	-
SA27298_RS00390 (SA27298_0078)	-	63205..64242 (+)	1038	WP_003032060.1	aldose epimerase family protein	-
SA27298_RS00395 (SA27298_0079)	ruvB	64417..65415 (+)	999	WP_003032066.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
SA27298_RS00400 (SA27298_0080)	-	65417..65980 (+)	564	WP_003032038.1	nucleotidyltransferase family protein	-
SA27298_RS00405 (SA27298_0081)	-	66217..66645 (+)	429	WP_003032058.1	low molecular weight protein-tyrosine-phosphatase	-
SA27298_RS00410 (SA27298_0082)	-	66654..67067 (+)	414	WP_003032074.1	MORN repeat-containing protein	-
SA27298_RS00415 (SA27298_0083)	-	67057..68874 (+)	1818	WP_003032079.1	acyltransferase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37337.67 Da
• Isoelectric Point: 4.3718

>NTDB_id=58764 SA27298_RS00395 WP_003032066.1 64417..65415(+) (ruvB) [Streptococcus anginosus strain CCUG 27928]
MSRILDNELMGDEELVERTLRPQYLREYIGQDKVKNQLKIFIEAAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVVEKAGDLVAILNDLEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGSGETSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAEADLTEIVERTADIFEMEITHEAAEELALRSRGTPRIANRLLKRVRDFAQIMGDGLID
DQITDQALTMLDVDQEGLDYVDQKILKTMIEVYGGGPVGLGTLSVNIAEEQETVEDMYEPYLIQKGFVMRTRTGRVATRK
AYEHLGYEYLEK

Nucleotide

• Length: 999 bp

>NTDB_id=58764 SA27298_RS00395 WP_003032066.1 64417..65415(+) (ruvB) [Streptococcus anginosus strain CCUG 27928]
ATGAGTAGAATTTTGGATAATGAACTGATGGGAGACGAGGAGCTCGTAGAGCGCACATTGCGTCCCCAGTATTTACGAGA
ATACATCGGTCAAGACAAGGTCAAAAATCAATTAAAGATTTTTATCGAGGCAGCTAAGTTGCGAGATGAAGCGCTAGATC
ACACGTTGCTTTTTGGACCTCCAGGGTTGGGAAAGACCACTATGGCTTTTGTCATTGCCAATGAACTGGGAGTCAATCTC
AAGCAAACTTCGGGTCCAGTTGTTGAGAAAGCGGGCGATTTGGTGGCAATCTTGAACGATTTGGAGCCGGGAGATGTTCT
CTTTATTGATGAGATTCACCGCTTGCCTATGTCTGTTGAAGAGGTGCTCTATAGCGCTATGGAAGATTTTTACATTGATA
TTATGATTGGCTCTGGCGAGACCAGTCGTAGTGTTCACTTGGATTTGCCACCGTTTACCTTGATTGGCGCTACGACCAGA
GCTGGTATGCTGTCCAATCCTTTACGGGCTCGTTTTGGCATTACTGGTCACATGGAATATTATGCAGAAGCAGATTTGAC
GGAGATTGTGGAGCGGACGGCAGACATCTTTGAAATGGAGATTACGCATGAAGCAGCTGAAGAATTAGCTCTGCGTAGCC
GGGGCACGCCTCGGATTGCCAATCGACTTCTTAAACGCGTACGAGATTTTGCTCAGATTATGGGTGACGGGCTGATTGAT
GACCAAATTACTGATCAAGCGCTGACGATGCTGGATGTGGATCAAGAAGGCTTAGATTATGTGGATCAGAAGATTCTTAA
GACCATGATTGAGGTTTATGGCGGCGGGCCAGTTGGTCTGGGGACTCTGTCTGTCAATATCGCAGAAGAGCAGGAAACGG
TAGAAGACATGTATGAGCCTTATTTGATCCAGAAAGGATTTGTTATGCGAACTCGAACAGGGCGTGTGGCAACTCGTAAA
GCTTACGAGCATTTGGGTTATGAATATTTGGAGAAATAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	92.771	100	0.928
ruvB	Streptococcus pneumoniae R6	92.47	100	0.925
ruvB	Streptococcus pneumoniae D39	92.47	100	0.925
ruvB	Bacillus subtilis subsp. subtilis str. 168	59.816	98.193	0.587
ruvB	Helicobacter pylori 26695	51.084	97.289	0.497
ruvB	Synechocystis sp. PCC 6803	50.323	93.373	0.47