Detailed information NTG0587625

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: KW115_RS04380
• Genome accession: NZ_CP079095
• Coordinates: 872397..873458 (-)
• Length: 353 a.a.
• NCBI ID: WP_218807941.1
• Uniprot ID: -
• Organism: Methylococcus sp. Mc7
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 867397..878458

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KW115_RS04355 (KW115_04355)	aroK	867827..868366 (-)	540	WP_218807936.1	shikimate kinase AroK	-
KW115_RS04360 (KW115_04360)	pilQ	868430..870535 (-)	2106	WP_255556597.1	type IV pilus secretin PilQ	-
KW115_RS04365 (KW115_04365)	-	870603..871154 (-)	552	WP_255556598.1	pilus assembly protein PilP	-
KW115_RS04370 (KW115_04370)	-	871154..871795 (-)	642	WP_218807939.1	type 4a pilus biogenesis protein PilO	-
KW115_RS04375 (KW115_04375)	-	871792..872397 (-)	606	WP_218807940.1	PilN domain-containing protein	-
KW115_RS04380 (KW115_04380)	pilM	872397..873458 (-)	1062	WP_218807941.1	pilus assembly protein PilM	Machinery gene
KW115_RS04385 (KW115_04385)	-	873457..873636 (+)	180	WP_218807942.1	hypothetical protein	-
KW115_RS04390 (KW115_04390)	-	873736..876231 (+)	2496	WP_218807943.1	penicillin-binding protein 1A	-
KW115_RS04395 (KW115_04395)	-	876247..876846 (+)	600	WP_255556599.1	hypothetical protein	-
KW115_RS04400 (KW115_04400)	rpmE	876907..877110 (-)	204	WP_218807944.1	50S ribosomal protein L31	-
KW115_RS04405 (KW115_04405)	-	877245..878018 (+)	774	WP_218807945.1	exodeoxyribonuclease III	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 38421.83 Da
• Isoelectric Point: 4.9350

>NTDB_id=587625 KW115_RS04380 WP_218807941.1 872397..873458(-) (pilM) [Methylococcus sp. Mc7]
MWGFGRKKPLLLGIDISAAAVKLLELSRKNGGYQVESYGVVPLPRNTVVDNTIAEPDNVSAAVRAVVKQSGTPLRHAVVA
VPGSVVITKRITMPASLGGDELEAQIELEADQYIPHAREEVSLDFEVLGKSSKNPDLVDVLLVATRRENVEDRVSVLENA
GLGVEIVDVESYAIERAFEMVRDQLPPPLRDRAVAVADVGAMATTLNVIHGGSIIYTREQGFGGMQLTDEIQRRYGLTHE
EAGLAKKEGSLPGNYAEEVLEPFKHALVQQISRSFQFYLSSTAQRGFDAVVLAGGCAMIPEIDRYVEAALQVPTVVANPF
RNMSFSGRVRQERLNYDSSALMLACGLALRSFD

Nucleotide

• Length: 1062 bp

>NTDB_id=587625 KW115_RS04380 WP_218807941.1 872397..873458(-) (pilM) [Methylococcus sp. Mc7]
ATGTGGGGCTTCGGAAGAAAGAAACCGCTCCTGCTGGGGATCGACATCAGCGCGGCGGCGGTCAAGCTGCTCGAGCTGAG
CCGAAAGAACGGCGGCTACCAGGTGGAAAGTTACGGCGTCGTGCCGTTGCCCCGGAACACGGTGGTCGACAACACGATCG
CCGAGCCGGACAACGTGTCGGCGGCGGTACGGGCCGTGGTCAAACAGTCGGGGACTCCGCTCCGGCACGCGGTGGTCGCG
GTGCCCGGCTCGGTGGTCATCACCAAGCGCATCACCATGCCCGCCAGCCTGGGGGGCGACGAACTCGAGGCGCAGATCGA
ATTGGAGGCGGACCAGTACATCCCCCATGCGAGGGAGGAGGTCAGCCTGGATTTCGAGGTGCTGGGAAAGAGCTCGAAGA
ATCCCGATCTGGTGGACGTGCTTCTGGTGGCTACGCGCCGGGAAAACGTGGAAGACCGGGTTTCGGTGCTGGAAAACGCG
GGCCTCGGCGTCGAGATCGTCGACGTGGAGTCCTACGCCATCGAACGCGCCTTCGAGATGGTCAGGGACCAGCTTCCGCC
GCCCCTCCGCGACCGGGCGGTAGCCGTGGCCGACGTGGGCGCCATGGCCACCACGCTCAACGTCATCCACGGCGGTTCCA
TCATCTACACCCGGGAACAGGGCTTCGGCGGCATGCAGTTGACCGACGAGATTCAGCGCCGCTACGGCCTGACCCACGAG
GAAGCGGGGCTGGCGAAGAAGGAAGGGAGCCTTCCCGGCAACTATGCCGAGGAAGTGCTGGAACCGTTCAAACACGCTTT
GGTTCAGCAGATCAGCCGTTCGTTCCAGTTCTATCTGTCGTCCACCGCTCAGCGCGGCTTCGACGCGGTGGTGCTGGCCG
GCGGCTGCGCCATGATTCCGGAAATCGACCGTTACGTAGAGGCGGCGTTGCAGGTTCCCACCGTCGTTGCGAATCCCTTC
CGTAACATGAGTTTTTCGGGGAGGGTCCGGCAGGAGCGCCTGAATTACGATTCCTCGGCCCTGATGCTGGCCTGCGGCCT
GGCGCTGCGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.895	97.167	0.504
comM	Acinetobacter nosocomialis M2	51.312	97.167	0.499
comM	Acinetobacter baylyi ADP1	48.857	99.15	0.484
pilM	Legionella pneumophila strain ERS1305867	43.023	97.45	0.419