Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EVX74_RS15020 | Genome accession | NZ_CP078045 |
| Coordinates | 3109601..3110188 (-) | Length | 195 a.a. |
| NCBI ID | WP_004281391.1 | Uniprot ID | A0A2K8UM26 |
| Organism | Acinetobacter lwoffii strain AL_065 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 3066497..3119268 | 3109601..3110188 | within | 0 |
Gene organization within MGE regions
Location: 3066497..3119268
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EVX74_RS14820 (EVX74_014730) | - | 3066497..3066724 (+) | 228 | WP_004729215.1 | hypothetical protein | - |
| EVX74_RS14830 (EVX74_014740) | - | 3067081..3067929 (-) | 849 | WP_004729214.1 | SAM-dependent methyltransferase | - |
| EVX74_RS14835 (EVX74_014745) | - | 3067933..3069240 (-) | 1308 | WP_004729213.1 | FAD-dependent oxidoreductase | - |
| EVX74_RS14840 (EVX74_014750) | ahpC | 3069862..3070425 (-) | 564 | WP_004278673.1 | alkyl hydroperoxide reductase subunit C | - |
| EVX74_RS14845 (EVX74_014755) | - | 3070894..3071985 (-) | 1092 | WP_129717602.1 | hypothetical protein | - |
| EVX74_RS14850 (EVX74_014760) | - | 3072399..3074222 (+) | 1824 | WP_129717604.1 | AAA family ATPase | - |
| EVX74_RS14855 (EVX74_014765) | - | 3074215..3075135 (+) | 921 | WP_129717606.1 | sensor histidine kinase | - |
| EVX74_RS14860 (EVX74_014770) | - | 3075135..3076589 (+) | 1455 | WP_165353931.1 | response regulator | - |
| EVX74_RS14865 (EVX74_014775) | - | 3076731..3077114 (+) | 384 | WP_001055589.1 | transposase | - |
| EVX74_RS14870 (EVX74_014780) | tnpB | 3077111..3077446 (+) | 336 | WP_000619347.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| EVX74_RS14875 (EVX74_014785) | tnpC | 3077521..3079146 (+) | 1626 | WP_337971626.1 | IS66 family transposase | - |
| EVX74_RS14880 (EVX74_014790) | - | 3079281..3079700 (-) | 420 | WP_129717981.1 | hypothetical protein | - |
| EVX74_RS14885 (EVX74_014795) | - | 3079702..3081030 (-) | 1329 | Protein_2877 | integrase | - |
| EVX74_RS14890 (EVX74_014800) | - | 3081087..3081542 (+) | 456 | WP_004730277.1 | helix-turn-helix domain-containing protein | - |
| EVX74_RS14895 (EVX74_014805) | - | 3081559..3082098 (+) | 540 | WP_225554437.1 | IS630 family transposase | - |
| EVX74_RS14900 (EVX74_014810) | - | 3082102..3082905 (-) | 804 | Protein_2880 | integrase | - |
| EVX74_RS14905 (EVX74_014815) | - | 3082898..3084454 (-) | 1557 | WP_129717610.1 | site-specific integrase | - |
| EVX74_RS14910 (EVX74_014820) | - | 3084447..3085673 (-) | 1227 | WP_129717612.1 | tyrosine-type recombinase/integrase | - |
| EVX74_RS14915 (EVX74_014825) | - | 3086230..3088302 (+) | 2073 | WP_129717614.1 | RecQ family ATP-dependent DNA helicase | - |
| EVX74_RS14920 (EVX74_014830) | - | 3088308..3089612 (+) | 1305 | WP_337971627.1 | DNA-processing protein DprA | - |
| EVX74_RS14925 (EVX74_014835) | - | 3089734..3091203 (-) | 1470 | WP_129717616.1 | hypothetical protein | - |
| EVX74_RS14930 | - | 3091148..3093718 (-) | 2571 | WP_129717618.1 | hypothetical protein | - |
| EVX74_RS14935 (EVX74_014845) | - | 3093832..3094038 (-) | 207 | WP_129717620.1 | helix-turn-helix domain-containing protein | - |
| EVX74_RS14940 | - | 3094236..3094451 (+) | 216 | WP_337971628.1 | hypothetical protein | - |
| EVX74_RS14945 (EVX74_014855) | tnpA | 3094494..3094922 (+) | 429 | WP_129717622.1 | IS66-like element accessory protein TnpA | - |
| EVX74_RS14950 (EVX74_014860) | tnpB | 3094919..3095254 (+) | 336 | WP_129717624.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| EVX74_RS14955 (EVX74_014865) | tnpC | 3095329..3096975 (+) | 1647 | WP_129717628.1 | IS66 family transposase | - |
| EVX74_RS14960 (EVX74_014870) | - | 3097034..3097276 (+) | 243 | WP_337971629.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| EVX74_RS14965 (EVX74_014875) | tnpB | 3097273..3097608 (+) | 336 | WP_000618090.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| EVX74_RS14970 (EVX74_014880) | - | 3097683..3099329 (+) | 1647 | WP_005252329.1 | IS66-like element ISAba17 family transposase | - |
| EVX74_RS14975 (EVX74_014885) | - | 3099899..3100405 (+) | 507 | WP_004278676.1 | GNAT family N-acetyltransferase | - |
| EVX74_RS14980 (EVX74_014890) | - | 3100511..3101305 (+) | 795 | WP_005252326.1 | condensation domain-containing protein | - |
| EVX74_RS14985 (EVX74_014895) | tnpA | 3101513..3101896 (+) | 384 | WP_000210456.1 | IS66-like element accessory protein TnpA | - |
| EVX74_RS14990 (EVX74_014900) | tnpB | 3101893..3102228 (+) | 336 | WP_004691519.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| EVX74_RS14995 (EVX74_014905) | tnpC | 3102303..3103907 (+) | 1605 | WP_337971668.1 | IS66 family transposase | - |
| EVX74_RS15000 (EVX74_014910) | - | 3104161..3104637 (-) | 477 | WP_005095125.1 | hypothetical protein | - |
| EVX74_RS15005 (EVX74_014915) | - | 3104630..3106633 (-) | 2004 | WP_129717663.1 | integrase | - |
| EVX74_RS15010 (EVX74_014920) | - | 3106630..3108207 (-) | 1578 | WP_129717661.1 | site-specific integrase | - |
| EVX74_RS15015 (EVX74_014925) | - | 3108212..3109384 (-) | 1173 | WP_129717659.1 | tyrosine-type recombinase/integrase | - |
| EVX74_RS15020 (EVX74_014930) | ssb | 3109601..3110188 (-) | 588 | WP_004281391.1 | single-stranded DNA-binding protein | Machinery gene |
| EVX74_RS15025 (EVX74_014935) | - | 3110240..3111604 (-) | 1365 | WP_035340698.1 | MFS transporter | - |
| EVX74_RS15030 (EVX74_014940) | - | 3111758..3112846 (-) | 1089 | WP_004729211.1 | DUF475 domain-containing protein | - |
| EVX74_RS15035 (EVX74_014945) | tenA | 3113069..3113740 (+) | 672 | WP_004729210.1 | thiaminase II | - |
| EVX74_RS15040 (EVX74_014950) | - | 3113963..3114331 (+) | 369 | WP_004729209.1 | hypothetical protein | - |
| EVX74_RS15045 (EVX74_014955) | uvrA | 3114513..3117344 (+) | 2832 | WP_004729208.1 | excinuclease ABC subunit UvrA | - |
| EVX74_RS15050 (EVX74_014960) | - | 3117462..3117755 (+) | 294 | WP_004729207.1 | AbiJ-NTD4 domain-containing protein | - |
| EVX74_RS15055 (EVX74_014965) | - | 3117803..3118207 (+) | 405 | WP_000669095.1 | transposase family protein | - |
| EVX74_RS15060 (EVX74_014970) | - | 3118245..3118637 (+) | 393 | Protein_2912 | transposase family protein | - |
| EVX74_RS15065 (EVX74_014975) | - | 3118645..3119268 (+) | 624 | WP_004729203.1 | AbiJ-NTD4 domain-containing protein | - |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 21359.06 Da Isoelectric Point: 6.4820
>NTDB_id=586524 EVX74_RS15020 WP_004281391.1 3109601..3110188(-) (ssb) [Acinetobacter lwoffii strain AL_065]
MRGVNKVILVGTLGKDPETKTFANGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSSRPQNDQGESSFNQPRFNNNNQANNNQGGYGNNPQSGYGSAPQQGGFNNN
QGGGYGNNNPSGFAPKSAPAPTAAPAADLDDDLPF
MRGVNKVILVGTLGKDPETKTFANGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSSRPQNDQGESSFNQPRFNNNNQANNNQGGYGNNPQSGYGSAPQQGGFNNN
QGGGYGNNNPSGFAPKSAPAPTAAPAADLDDDLPF
Nucleotide
Download Length: 588 bp
>NTDB_id=586524 EVX74_RS15020 WP_004281391.1 3109601..3110188(-) (ssb) [Acinetobacter lwoffii strain AL_065]
ATGCGTGGTGTAAATAAAGTTATTTTAGTGGGTACTTTGGGTAAAGATCCGGAAACCAAAACTTTTGCAAATGGTGGCTC
TCTCACTCAATTCTCGATCGCAACCAGCGATTCGTGGACAGATAAAAGTACCGGTGAACGTAAAGAACAAACGGAATGGC
ACCGTATCGTGTTGCATAACCGTTTAGGTGAAATTGCACAGCAATATCTTCGTAAAGGCTCAAAAGTATATATTGAAGGT
TCATTACGTACCCGTCAGTGGACTGACCAGAATGGTCAGGAGCGCTATACGACGGAAATTCGTGGTGAACAAATGCAGAT
GTTAGACTCTAGCCGTCCTCAAAATGATCAGGGCGAGAGCAGCTTTAACCAGCCACGCTTTAATAACAATAATCAGGCGA
ACAACAACCAGGGTGGTTATGGCAATAACCCGCAATCAGGTTATGGTTCAGCGCCACAGCAAGGCGGTTTTAACAACAAT
CAGGGCGGCGGTTATGGCAACAATAACCCGAGTGGTTTTGCGCCGAAATCTGCACCTGCTCCAACAGCAGCGCCTGCAGC
AGATCTAGATGATGACTTACCATTTTAG
ATGCGTGGTGTAAATAAAGTTATTTTAGTGGGTACTTTGGGTAAAGATCCGGAAACCAAAACTTTTGCAAATGGTGGCTC
TCTCACTCAATTCTCGATCGCAACCAGCGATTCGTGGACAGATAAAAGTACCGGTGAACGTAAAGAACAAACGGAATGGC
ACCGTATCGTGTTGCATAACCGTTTAGGTGAAATTGCACAGCAATATCTTCGTAAAGGCTCAAAAGTATATATTGAAGGT
TCATTACGTACCCGTCAGTGGACTGACCAGAATGGTCAGGAGCGCTATACGACGGAAATTCGTGGTGAACAAATGCAGAT
GTTAGACTCTAGCCGTCCTCAAAATGATCAGGGCGAGAGCAGCTTTAACCAGCCACGCTTTAATAACAATAATCAGGCGA
ACAACAACCAGGGTGGTTATGGCAATAACCCGCAATCAGGTTATGGTTCAGCGCCACAGCAAGGCGGTTTTAACAACAAT
CAGGGCGGCGGTTATGGCAACAATAACCCGAGTGGTTTTGCGCCGAAATCTGCACCTGCTCCAACAGCAGCGCCTGCAGC
AGATCTAGATGATGACTTACCATTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.759 |
100 |
0.528 |
| ssb | Vibrio cholerae strain A1552 |
41.206 |
100 |
0.421 |
| ssb | Neisseria meningitidis MC58 |
37.5 |
98.462 |
0.369 |
| ssb | Neisseria gonorrhoeae MS11 |
37.5 |
98.462 |
0.369 |