Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   EVX74_RS01295 Genome accession   NZ_CP078045
Coordinates   305347..306486 (-) Length   379 a.a.
NCBI ID   WP_005249630.1    Uniprot ID   N9NVS1
Organism   Acinetobacter lwoffii strain AL_065     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 300347..311486
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EVX74_RS01270 (EVX74_001260) - 300603..301598 (-) 996 WP_005265469.1 pirin family protein -
  EVX74_RS01275 (EVX74_001265) - 301740..302339 (-) 600 WP_005108413.1 hypothetical protein -
  EVX74_RS01280 (EVX74_001270) - 302670..303215 (-) 546 WP_005249624.1 glutathione peroxidase -
  EVX74_RS01285 (EVX74_001275) - 303406..304302 (+) 897 WP_005265470.1 DMT family transporter -
  EVX74_RS01290 (EVX74_001280) - 304736..305305 (-) 570 WP_005249628.1 L-threonylcarbamoyladenylate synthase -
  EVX74_RS01295 (EVX74_001285) dprA 305347..306486 (-) 1140 WP_005249630.1 DNA-processing protein DprA Machinery gene
  EVX74_RS01300 (EVX74_001290) tsaP 306543..307697 (-) 1155 WP_004732589.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  EVX74_RS01305 (EVX74_001295) def 307818..308348 (+) 531 WP_004644875.1 peptide deformylase -
  EVX74_RS01310 (EVX74_001300) - 308441..308851 (+) 411 WP_004644876.1 DUF2946 family protein -
  EVX74_RS01315 (EVX74_001305) - 308924..311011 (+) 2088 WP_005249632.1 TonB-dependent copper receptor -

Sequence


Protein


Download         Length: 379 a.a.        Molecular weight: 42572.53 Da        Isoelectric Point: 6.5744

>NTDB_id=586492 EVX74_RS01295 WP_005249630.1 305347..306486(-) (dprA) [Acinetobacter lwoffii strain AL_065]
MLNPLSRAQLETITLWYLVQHSLSSFYKISQHYAELANAIQQDQVPVWQALGIHVNHVQRLKELHLPEAQQKFQRCLQQI
QQDSDFILLHSDPHYPQQLHPYVDKPPIIFGQGRPDTLLQAQIAIVGSRKPSPHGRQVAYDFAFYLSEQGFYINSGLAHG
IDEAAHRAALQHQGTIAVMATGLDQTYPAQHQSLRQQIIEHGGAVISEFLPDTLPLQHHFPRRNRMVSGLSLGVIVAEAA
LKSGSLITAKLAAEQGKTVFAIPGHIYSEHHQGCHQLIREGAILIDHPQQVIEELALATQWQAMENTTKMEVTEAEPQQI
PPHLLSLYNQLDWVGQSLDQLGTQVQQEVSALTSQLMELELLGFCTQQAGLYLRCRILK

Nucleotide


Download         Length: 1140 bp        

>NTDB_id=586492 EVX74_RS01295 WP_005249630.1 305347..306486(-) (dprA) [Acinetobacter lwoffii strain AL_065]
ATGCTGAACCCGTTATCACGCGCGCAACTGGAAACAATTACGTTATGGTATCTGGTTCAGCATTCTCTTTCGAGTTTTTA
TAAAATCAGTCAACACTATGCCGAACTGGCCAATGCCATTCAGCAGGATCAGGTACCCGTCTGGCAGGCACTCGGTATTC
ATGTCAATCATGTGCAGCGCTTAAAAGAGTTACACCTCCCAGAAGCGCAACAGAAATTTCAGCGTTGTCTGCAACAGATC
CAGCAGGATAGCGATTTTATTTTATTGCATAGCGATCCGCATTACCCGCAGCAGTTGCATCCTTATGTAGATAAACCACC
GATCATTTTTGGTCAAGGTCGACCTGATACCCTGCTTCAGGCACAGATTGCAATTGTGGGCAGTCGCAAGCCGAGTCCGC
ATGGCCGGCAAGTGGCTTATGATTTTGCCTTTTATTTGAGTGAACAGGGTTTCTATATCAATAGCGGTCTGGCACACGGC
ATTGATGAAGCGGCACATCGGGCTGCCCTACAGCATCAAGGCACGATTGCGGTGATGGCCACCGGACTGGATCAAACCTA
TCCAGCACAGCATCAGTCACTGCGCCAGCAAATTATTGAACATGGCGGTGCCGTCATCAGCGAATTTCTGCCAGATACCC
TTCCTCTGCAACACCATTTTCCACGGCGCAACCGAATGGTCAGTGGTTTAAGTCTGGGCGTGATTGTGGCAGAAGCGGCA
TTAAAAAGTGGTTCTCTCATTACGGCCAAGCTGGCAGCCGAACAAGGCAAAACCGTGTTTGCCATTCCGGGACATATTTA
CAGTGAGCATCATCAGGGCTGTCACCAACTGATTCGTGAGGGTGCGATTCTGATTGATCACCCACAGCAGGTCATCGAAG
AACTGGCACTGGCGACGCAATGGCAAGCGATGGAAAACACCACCAAAATGGAAGTTACTGAAGCAGAACCTCAGCAGATT
CCGCCACATCTGCTCAGTCTTTATAATCAACTGGACTGGGTGGGACAGAGTCTGGATCAGCTGGGGACACAGGTACAGCA
AGAAGTGTCTGCGCTGACCAGTCAACTGATGGAGCTGGAGTTACTCGGTTTTTGTACCCAGCAAGCCGGCCTGTATCTAC
GTTGTCGGATTCTCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N9NVS1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

63.564

99.208

0.631

  dprA Acinetobacter baumannii D1279779

62.766

99.208

0.623

  dprA Acinetobacter baylyi ADP1

59.055

100

0.594

  dprA Vibrio cholerae strain A1552

41.742

87.863

0.367