Detailed information NTG0586280

Bioinformatically predicted

Overview

• Name: vicR
• Type: Regulator
• Locus tag: KV238_RS10655
• Genome accession: NZ_CP078012
• Coordinates: 2172232..2172954 (-)
• Length: 240 a.a.
• NCBI ID: WP_230923657.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ_18-036
• Function: repress comCDE expression; repress comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 2167232..2177954

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KV238_RS10630 (KV238_10610)	pstB	2167397..2168149 (-)	753	WP_043029925.1	phosphate ABC transporter ATP-binding protein PstB	-
KV238_RS10635 (KV238_10615)	pstA	2168151..2168966 (-)	816	WP_230923655.1	phosphate ABC transporter permease PstA	-
KV238_RS10640 (KV238_10620)	pstC	2168959..2169822 (-)	864	WP_012677663.1	phosphate ABC transporter permease subunit PstC	-
KV238_RS10645 (KV238_10625)	-	2169892..2170764 (-)	873	WP_230923656.1	substrate-binding domain-containing protein	-
KV238_RS10650 (KV238_10630)	pnpS	2170923..2172248 (-)	1326	WP_012677661.1	two-component system histidine kinase PnpS	-
KV238_RS10655 (KV238_10635)	vicR	2172232..2172954 (-)	723	WP_230923657.1	response regulator transcription factor	Regulator
KV238_RS10660 (KV238_10640)	-	2173126..2173281 (+)	156	WP_043029929.1	SPJ_0845 family protein	-
KV238_RS10665 (KV238_10645)	-	2173322..2174224 (+)	903	WP_021320980.1	permease	-
KV238_RS10670 (KV238_10650)	-	2174224..2175039 (+)	816	WP_165623620.1	TIGR03943 family putative permease subunit	-
KV238_RS10675 (KV238_10655)	-	2175224..2176643 (-)	1420	Protein_2053	glycoside hydrolase family 1 protein	-
KV238_RS00005 (KV238_10660)	-	2176670..2177215 (-)	546	Protein_2054	PTS glucose transporter subunit IIA	-

Sequence

Protein

• Length: 240 a.a.
• Molecular weight: 28127.54 Da
• Isoelectric Point: 6.1653

>NTDB_id=586280 KV238_RS10655 WP_230923657.1 2172232..2172954(-) (vicR) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
MTKRVLLVDDEEPILRLLDYHLAKEGFVTEMVTDGRTALALAEREPYDFIVLDIMLPQLDGIEVCKRLRSKGSKTPIMMV
SAKSDEFDKVLALELGADDYVTKPFSPRELLARVKAILRRTEAEISGDGEERREPFYTMSQLRLYPERHEVYKDKELLPL
TPKEYELLLYLMKHPNMTLTRERLLERIWGYDFGQETRLVDVHIGKLREKIEDNPKAPQYIQTIRGYGYKFKELKNDRTS

Nucleotide

• Length: 723 bp

>NTDB_id=586280 KV238_RS10655 WP_230923657.1 2172232..2172954(-) (vicR) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
ATGACAAAACGAGTATTATTAGTAGATGATGAGGAGCCTATCTTAAGGCTACTGGATTATCATTTGGCCAAGGAGGGCTT
TGTGACAGAGATGGTAACAGATGGCCGTACTGCCTTGGCATTAGCTGAAAGAGAACCTTATGATTTTATTGTGTTAGATA
TTATGCTGCCGCAATTAGACGGTATCGAGGTCTGCAAAAGGCTTCGTTCTAAGGGAAGTAAAACCCCAATTATGATGGTT
TCTGCTAAAAGTGATGAATTTGACAAGGTTTTGGCTTTGGAACTGGGGGCAGATGATTATGTGACCAAGCCCTTTAGTCC
TAGAGAATTATTAGCGCGTGTCAAGGCTATTTTAAGGCGCACTGAAGCAGAGATTTCTGGTGATGGTGAGGAGCGTCGTG
AGCCTTTTTATACGATGAGTCAATTGCGTCTGTACCCAGAGCGACATGAGGTCTATAAGGACAAGGAGCTATTGCCGTTA
ACCCCAAAGGAATATGAGCTACTGCTCTATCTCATGAAGCACCCTAATATGACCTTGACGCGTGAGCGGCTATTAGAGCG
TATCTGGGGTTATGACTTTGGCCAAGAAACACGTCTGGTAGACGTTCATATTGGCAAGCTCAGAGAAAAAATTGAGGACA
ATCCTAAGGCGCCTCAGTATATTCAAACCATTCGCGGCTATGGATACAAATTTAAGGAGCTAAAGAATGATAGGACATCT
TAG

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (158-231)

• Response regulator receiver domain (Response_reg) (5-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
vicR	Streptococcus mutans UA159	52.155	96.667	0.504
micA	Streptococcus pneumoniae Cp1015	50	95.833	0.479
covR	Lactococcus lactis subsp. lactis strain DGCC12653	44.017	97.5	0.429
covR	Streptococcus salivarius strain HSISS4	40.773	97.083	0.396