Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   KV238_RS08195 Genome accession   NZ_CP078012
Coordinates   1690863..1692173 (+) Length   436 a.a.
NCBI ID   WP_159334696.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ_18-036     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1685863..1697173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KV238_RS08180 (KV238_08170) phoU 1686349..1687002 (+) 654 WP_012678018.1 phosphate signaling complex protein PhoU -
  KV238_RS08185 (KV238_08175) - 1687232..1689769 (+) 2538 WP_043983578.1 M1 family metallopeptidase -
  KV238_RS08190 (KV238_08180) ciaR 1690196..1690870 (+) 675 WP_043983576.1 response regulator transcription factor Regulator
  KV238_RS08195 (KV238_08185) ciaH 1690863..1692173 (+) 1311 WP_159334696.1 sensor histidine kinase Regulator
  KV238_RS08200 (KV238_08190) - 1692556..1692990 (+) 435 WP_043030769.1 hypothetical protein -
  KV238_RS08205 (KV238_08195) - 1692991..1693236 (+) 246 WP_043030765.1 hypothetical protein -
  KV238_RS08210 (KV238_08200) - 1693252..1693659 (+) 408 WP_014622815.1 hypothetical protein -
  KV238_RS08215 (KV238_08205) - 1693669..1693959 (+) 291 WP_021320713.1 hypothetical protein -
  KV238_RS08220 (KV238_08210) - 1693883..1694266 (+) 384 WP_012678013.1 hypothetical protein -
  KV238_RS08225 (KV238_08215) - 1694268..1694519 (+) 252 WP_012678012.1 hypothetical protein -
  KV238_RS08230 (KV238_08220) - 1694695..1695075 (+) 381 WP_042670594.1 hypothetical protein -
  KV238_RS08235 (KV238_08225) - 1695072..1695332 (+) 261 WP_021320716.1 hypothetical protein -
  KV238_RS08240 (KV238_08230) - 1695348..1695761 (+) 414 WP_230923512.1 hypothetical protein -
  KV238_RS08245 (KV238_08235) - 1695762..1696955 (+) 1194 WP_024273226.1 lipase -

Sequence

Protein


Download         Length: 436 a.a.        Molecular weight: 49736.38 Da        Isoelectric Point: 9.5602

>NTDB_id=586274 KV238_RS08195 WP_159334696.1 1690863..1692173(+) (ciaH) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
MNKLKKELLSDNYTHFFHFFAIFTGIFVVMTIIILQIMRFSVYSTVDSSLISVGQNASNYANRTMARISSFYFDAENNLI
QALPELEASKSLGSSTTNMDIILFSANGTILNSFDAFSNYQSFRLDKSQLNNIVTTQLMNFYGQKEKYHTLTVKVHIKNY
PAVAYMMAVVNVQQLDTANERYEQIIIMVMIVFWLISILASIYLAKWSRKPIMESYAKQKMFVENASHELRTPLAVLQNR
LESLFRKPNETILDNSEHIASSLDEVRNMRILTTNLLNLARRDDGIKPQLVDVDAAFFDTVFENYQLVAEESGKQFISAN
QINRPLKTDKALLRQLMTILFDNAIKYTDHNGMVEVKVRTTDKHLLISVIDNGPGIKDDDKKKIFDRFYRVDKARTRQKG
GFGLGLALAQQIVTSLKGTITVSDNKPTGTIFEVKL

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=586274 KV238_RS08195 WP_159334696.1 1690863..1692173(+) (ciaH) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
ATGAATAAACTAAAAAAAGAATTATTGTCCGATAATTATACACATTTTTTTCATTTCTTTGCTATTTTTACAGGCATTTT
TGTTGTCATGACCATCATTATTTTGCAAATCATGAGGTTTAGTGTCTATTCCACAGTAGACAGCAGTCTCATTTCGGTCG
GTCAAAATGCCAGCAACTATGCTAATAGGACCATGGCGAGAATATCTTCCTTTTATTTTGATGCAGAAAATAACCTTATT
CAGGCTCTTCCTGAACTGGAAGCGTCAAAATCACTTGGCTCCTCCACCACTAATATGGATATTATTTTATTTAGTGCTAA
TGGGACGATATTGAACTCCTTTGACGCTTTCTCTAATTACCAAAGCTTTCGTTTAGACAAAAGCCAGCTCAATAACATTG
TCACCACACAGCTGATGAATTTTTATGGGCAAAAGGAGAAATACCATACCCTAACCGTTAAGGTTCACATTAAAAACTAT
CCAGCAGTGGCTTATATGATGGCAGTGGTTAATGTTCAGCAGCTGGATACTGCTAATGAGCGCTATGAACAGATTATTAT
CATGGTTATGATTGTCTTTTGGTTAATTTCGATTTTGGCCAGTATTTATTTGGCTAAGTGGAGCAGAAAGCCAATTATGG
AGAGCTATGCCAAGCAAAAAATGTTTGTAGAAAATGCCAGTCATGAGCTTAGGACTCCTTTAGCGGTGCTGCAAAATCGT
TTGGAATCGCTGTTTAGAAAGCCTAACGAAACCATTTTAGACAATAGCGAGCATATTGCGTCAAGCCTAGATGAGGTTCG
TAATATGAGAATATTAACCACTAATTTGTTAAACCTAGCGAGACGTGATGATGGGATCAAGCCGCAGCTGGTTGATGTTG
ATGCAGCATTTTTTGACACTGTTTTTGAAAATTATCAATTAGTTGCAGAAGAATCAGGCAAGCAGTTTATCTCAGCTAAT
CAGATCAATAGGCCCTTAAAGACGGATAAGGCTTTACTCAGGCAGCTGATGACCATTTTGTTTGATAATGCGATCAAATA
CACTGACCATAACGGTATGGTTGAGGTCAAGGTTAGAACGACTGATAAGCATTTATTGATTTCTGTTATTGATAATGGCC
CAGGGATCAAGGATGATGATAAGAAAAAGATTTTTGATCGCTTTTACCGAGTGGATAAGGCAAGGACACGCCAAAAAGGA
GGCTTTGGACTCGGATTGGCCTTAGCGCAGCAGATCGTTACCTCATTAAAAGGAACGATTACCGTCAGTGATAATAAGCC
TACCGGTACCATATTTGAAGTAAAATTATAG

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(220-285)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(329-436)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

57.666

100

0.578
  ciaH Streptococcus pneumoniae Rx1

51.376

100

0.514
  ciaH Streptococcus pneumoniae D39

51.376

100

0.514
  ciaH Streptococcus pneumoniae R6

51.376

100

0.514
  ciaH Streptococcus pneumoniae TIGR4

51.376

100

0.514