Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicR   Type   Regulator
Locus tag   KVP03_RS05735 Genome accession   NZ_CP077959
Coordinates   1195703..1196425 (+) Length   240 a.a.
NCBI ID   WP_042670937.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ_14-145     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1190703..1201425
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KVP03_RS05715 (KVP03_05695) - 1192011..1193432 (+) 1422 WP_012679829.1 glycoside hydrolase family 1 protein -
  KVP03_RS05720 (KVP03_05700) - 1193618..1194433 (-) 816 WP_014623169.1 TIGR03943 family putative permease subunit -
  KVP03_RS05725 (KVP03_05705) - 1194433..1195335 (-) 903 WP_012677658.1 permease -
  KVP03_RS05730 (KVP03_05710) - 1195376..1195531 (-) 156 WP_012515968.1 SPJ_0845 family protein -
  KVP03_RS05735 (KVP03_05715) vicR 1195703..1196425 (+) 723 WP_042670937.1 response regulator transcription factor Regulator
  KVP03_RS05740 (KVP03_05720) pnpS 1196409..1197734 (+) 1326 WP_154299067.1 two-component system histidine kinase PnpS -
  KVP03_RS05745 (KVP03_05725) - 1197893..1198765 (+) 873 WP_230922965.1 substrate-binding domain-containing protein -
  KVP03_RS05750 (KVP03_05730) pstC 1198835..1199698 (+) 864 WP_154299065.1 phosphate ABC transporter permease subunit PstC -
  KVP03_RS05755 (KVP03_05735) pstA 1199691..1200506 (+) 816 WP_012679824.1 phosphate ABC transporter permease PstA -
  KVP03_RS05760 (KVP03_05740) pstB 1200508..1201260 (+) 753 WP_154299064.1 phosphate ABC transporter ATP-binding protein PstB -

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 28093.51 Da        Isoelectric Point: 6.1653

>NTDB_id=585662 KVP03_RS05735 WP_042670937.1 1195703..1196425(+) (vicR) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
MTKRVLLVDDEEPILRLLDYHLAKEGFVTEIVTDGRTALALAEREPYDFIVLDIMLPQLDGIEVCKRLRAKGSKTPIMMV
SAKSDEFDKVLALELGADDYVTKPFSPRELLARVKAILRRTEAEISGDGEERREPFYTMSQLRLYPERHEVYKDKELLPL
TPKEYELLLYLMKHPNMTLTRERLLERIWGYDFGQETRLVDVHIGKLREKIEDNPKAPQYIQTIRGYGYKFKELKNDRTS

Nucleotide


Download         Length: 723 bp        

>NTDB_id=585662 KVP03_RS05735 WP_042670937.1 1195703..1196425(+) (vicR) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
ATGACAAAACGAGTATTATTAGTAGATGATGAGGAGCCTATCTTAAGGCTATTGGATTATCACTTGGCCAAGGAGGGCTT
TGTGACAGAGATAGTAACAGATGGCCGTACTGCCTTGGCATTAGCTGAAAGAGAACCTTATGATTTTATTGTGTTAGATA
TTATGCTGCCGCAATTAGACGGTATCGAGGTCTGCAAAAGGCTTCGTGCTAAGGGAAGCAAAACCCCAATTATGATGGTT
TCTGCTAAAAGTGATGAATTTGACAAGGTTTTGGCTTTGGAGCTGGGGGCAGATGATTATGTGACCAAGCCCTTTAGTCC
TAGAGAATTATTAGCGCGTGTCAAGGCTATTTTAAGGCGTACTGAAGCAGAGATTTCTGGTGATGGTGAAGAGCGTCGTG
AGCCTTTTTATACGATGAGTCAATTGCGTCTGTACCCAGAGCGACATGAGGTCTATAAGGACAAGGAGCTATTGCCGTTA
ACCCCAAAGGAATATGAGCTACTGCTCTATCTCATGAAGCACCCTAATATGACCTTGACGCGTGAGCGGCTATTAGAGCG
TATCTGGGGTTATGACTTTGGCCAAGAAACACGTCTGGTAGACGTTCATATTGGCAAGCTCAGAGAAAAAATTGAGGACA
ATCCTAAGGCGCCTCAGTATATTCAAACCATTCGCGGCTATGGATACAAATTTAAGGAGCTAAAGAATGATAGGACATCT
TAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(5-115)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(158-231)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicR Streptococcus mutans UA159

52.155

96.667

0.504
  micA Streptococcus pneumoniae Cp1015

50

95.833

0.479
  covR Lactococcus lactis subsp. lactis strain DGCC12653

44.444

97.5

0.433
  covR Streptococcus salivarius strain HSISS4

40.773

97.083

0.396