Detailed information NTG0058539

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: MDRSPN_RS05365
• Genome accession: NZ_AP018391
• Coordinates: 1042709..1043662 (-)
• Length: 317 a.a.
• NCBI ID: WP_000495904.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain MDRSPN001
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1037709..1048662

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MDRSPN_RS05335	-	1038197..1038292 (-)	96	Protein_1022	IS630 family transposase	-
MDRSPN_RS05345 (MDRSPN_01019)	-	1038705..1039046 (+)	342	Protein_1023	transposase	-
MDRSPN_RS05350 (MDRSPN_01020)	prsA	1039165..1040106 (-)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
MDRSPN_RS05355 (MDRSPN_01021)	-	1040173..1040886 (-)	714	WP_078138303.1	O-methyltransferase	-
MDRSPN_RS05360 (MDRSPN_01022)	pepF	1040888..1042690 (-)	1803	WP_120164220.1	oligoendopeptidase F	Regulator
MDRSPN_RS05365 (MDRSPN_01023)	coiA	1042709..1043662 (-)	954	WP_000495904.1	competence protein CoiA	Machinery gene
MDRSPN_RS05370 (MDRSPN_01024)	tehB	1043735..1044595 (-)	861	WP_000413765.1	SAM-dependent methyltransferase TehB	-
MDRSPN_RS05375 (MDRSPN_01025)	smpB	1044611..1045078 (-)	468	WP_001051750.1	SsrA-binding protein SmpB	-
MDRSPN_RS05380 (MDRSPN_01026)	rnr	1045041..1047395 (-)	2355	WP_000654886.1	ribonuclease R	-
MDRSPN_RS05385 (MDRSPN_01027)	secG	1047497..1047730 (-)	234	WP_000282517.1	preprotein translocase subunit SecG	-
MDRSPN_RS05390	rpmG	1047770..1047919 (-)	150	WP_001810029.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38248.93 Da
• Isoelectric Point: 9.2255

>NTDB_id=58539 MDRSPN_RS05365 WP_000495904.1 1042709..1043662(-) (coiA) [Streptococcus pneumoniae strain MDRSPN001]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSKNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYRNFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=58539 MDRSPN_RS05365 WP_000495904.1 1042709..1043662(-) (coiA) [Streptococcus pneumoniae strain MDRSPN001]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTAAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATTCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCGGAACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.054	100	0.991
coiA	Streptococcus pneumoniae Rx1	98.423	100	0.984
coiA	Streptococcus pneumoniae D39	98.423	100	0.984
coiA	Streptococcus pneumoniae R6	98.423	100	0.984
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.901	100	0.438