Detailed information NTG0585378

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: MW889_RS11680
• Genome accession: NZ_CP095867
• Coordinates: 2458184..2459188 (+)
• Length: 334 a.a.
• NCBI ID: WP_002052424.1
• Uniprot ID: A0AA36K9C9
• Organism: Acinetobacter nosocomialis strain 11J360
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2453184..2464188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW889_RS11665 (MW889_11680)	-	2455559..2456899 (+)	1341	WP_004885767.1	deoxyguanosinetriphosphate triphosphohydrolase	-
MW889_RS11670 (MW889_11685)	-	2456899..2457567 (+)	669	WP_004885766.1	hypothetical protein	-
MW889_RS11675 (MW889_11690)	ruvA	2457576..2458175 (+)	600	WP_004707498.1	Holliday junction branch migration protein RuvA	-
MW889_RS11680 (MW889_11695)	ruvB	2458184..2459188 (+)	1005	WP_002052424.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
MW889_RS11685 (MW889_11700)	-	2459393..2460727 (+)	1335	WP_004885765.1	M20 family metallopeptidase	-
MW889_RS11690 (MW889_11705)	ybgC	2460938..2461345 (+)	408	WP_002052673.1	tol-pal system-associated acyl-CoA thioesterase	-
MW889_RS11695 (MW889_11710)	tolQ	2461370..2462068 (+)	699	WP_002052880.1	protein TolQ	-
MW889_RS11700 (MW889_11715)	tolR	2462068..2462520 (+)	453	WP_002052868.1	protein TolR	-
MW889_RS11705 (MW889_11720)	tolA	2462524..2463924 (+)	1401	WP_033846095.1	cell envelope integrity protein TolA	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36802.05 Da
• Isoelectric Point: 4.7936

>NTDB_id=585378 MW889_RS11680 WP_002052424.1 2458184..2459188(+) (ruvB) [Acinetobacter nosocomialis strain 11J360]
MQDRLISGTEKPEDHFDRAIRPTSLADYIGQPVVREQMEIFIGAARGRGEALDHTLIFGPPGLGKTTLANIIAREMGGNL
KSTSGPVLERAGDLAAMLTNLEEGDVLFIDEIHRLSPVIEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVAATTR
AGLLTSPLRDRFGIVQRLEFYSVEDLTHIVSRSANLMDVPITVEGAEEVARRSRGTPRIANRLLRRVRDYAQVKGTGEVT
HEMAQRALDMLNVDKAGLDTLDRRYLSMLLERFDGGPAGVEALAAAMAEDSGTLEDVIEPYLIQQGYVMRTARGRIATNQ
SYLQFGMTPPEPKN

Nucleotide

• Length: 1005 bp

>NTDB_id=585378 MW889_RS11680 WP_002052424.1 2458184..2459188(+) (ruvB) [Acinetobacter nosocomialis strain 11J360]
ATGCAAGACCGTCTAATCAGTGGAACAGAAAAACCTGAAGATCATTTTGATCGGGCTATTCGACCGACTTCACTTGCCGA
TTATATTGGACAGCCAGTTGTACGCGAGCAAATGGAAATTTTCATCGGTGCGGCTCGTGGTCGTGGTGAAGCACTCGATC
ACACACTGATTTTCGGTCCACCGGGCTTAGGAAAAACCACGCTTGCCAATATTATTGCGCGTGAAATGGGTGGCAATCTC
AAATCCACTTCAGGACCTGTTTTAGAGCGTGCGGGTGATTTGGCTGCAATGCTCACCAACCTTGAAGAAGGCGATGTTCT
ATTTATTGATGAAATTCACCGTCTTTCTCCAGTGATTGAAGAAATTCTGTATCCGGCAATGGAAGATTACCAACTCGATA
TCATGATTGGTGAAGGCCCTGCTGCTCGTTCAATTAAACTAGATTTACCACCTTTTACGCTCGTTGCTGCCACCACACGT
GCCGGCTTACTCACCTCACCTCTACGCGACCGTTTTGGTATTGTGCAGCGTCTTGAGTTTTACTCTGTAGAAGACCTAAC
TCATATCGTGTCACGTTCTGCAAACCTCATGGATGTACCAATTACAGTTGAAGGTGCAGAAGAAGTAGCTCGTCGCTCAC
GCGGTACTCCGCGTATTGCCAACCGTTTATTACGACGTGTTCGAGACTATGCACAAGTAAAAGGTACGGGTGAAGTGACT
CATGAAATGGCACAACGTGCGCTTGATATGCTCAATGTTGATAAAGCTGGTCTAGATACCCTAGACCGTCGTTATTTGAG
CATGTTACTCGAGCGTTTTGATGGCGGTCCTGCTGGAGTTGAAGCGCTTGCAGCTGCCATGGCTGAAGACAGCGGCACAC
TTGAAGACGTGATTGAACCTTATTTAATTCAACAAGGTTATGTCATGCGTACCGCACGAGGTCGTATAGCAACCAACCAA
TCTTATTTACAGTTTGGAATGACGCCCCCTGAGCCTAAAAACTAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-322)

3D structure

• AlphaFold DB: A0AA36K9C9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	58.006	99.102	0.575
ruvB	Synechocystis sp. PCC 6803	57.325	94.012	0.539
ruvB	Streptococcus pneumoniae TIGR4	56.113	95.509	0.536
ruvB	Streptococcus pneumoniae R6	56.113	95.509	0.536
ruvB	Streptococcus pneumoniae D39	56.113	95.509	0.536
ruvB	Helicobacter pylori 26695	54.934	91.018	0.5