Detailed information NTG0585226

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: KU538_RS12420
• Genome accession: NZ_CP077922
• Coordinates: 2530367..2530870 (+)
• Length: 167 a.a.
• NCBI ID: WP_000934799.1
• Uniprot ID: A0A7U7IE99
• Organism: Staphylococcus aureus strain 202
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2525367..2535870

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KU538_RS12390 (KU538_12300)	-	2526307..2527152 (+)	846	WP_001825659.1	ParB/RepB/Spo0J family partition protein	-
KU538_RS12395 (KU538_12305)	-	2527306..2528187 (+)	882	WP_000373073.1	mechanosensitive ion channel family protein	-
KU538_RS12400 (KU538_12310)	-	2528217..2528420 (+)	204	WP_000157348.1	DUF951 domain-containing protein	-
KU538_RS12405 (KU538_12315)	ychF	2528432..2529529 (+)	1098	WP_001218732.1	redox-regulated ATPase YchF	-
KU538_RS12410 (KU538_12320)	-	2529615..2529806 (-)	192	WP_001052481.1	hypothetical protein	-
KU538_RS12415 (KU538_12325)	rpsF	2530050..2530346 (+)	297	WP_225805663.1	30S ribosomal protein S6	-
KU538_RS12420 (KU538_12330)	ssbA	2530367..2530870 (+)	504	WP_000934799.1	single-stranded DNA-binding protein	Machinery gene
KU538_RS12425 (KU538_12335)	rpsR	2530922..2531164 (+)	243	WP_000897044.1	30S ribosomal protein S18	-
KU538_RS13475	-	2531401..2531628 (-)	228	Protein_2430	Abi family protein	-
KU538_RS12430 (KU538_12340)	-	2531621..2531897 (-)	277	Protein_2431	site-specific integrase	-
KU538_RS12435 (KU538_12345)	-	2531976..2532290 (+)	315	Protein_2432	exotoxin beta-grasp domain-containing protein	-
KU538_RS12440 (KU538_12350)	-	2532656..2533024 (+)	369	WP_000849156.1	YxeA family protein	-
KU538_RS12445 (KU538_12355)	-	2533204..2533776 (+)	573	WP_000769718.1	PepSY domain-containing protein	-
KU538_RS12450 (KU538_12360)	-	2533914..2534177 (-)	264	WP_001055897.1	helix-turn-helix domain-containing protein	-
KU538_RS12455 (KU538_12365)	-	2534471..2534722 (+)	252	WP_000466741.1	GlsB/YeaQ/YmgE family stress response membrane protein	-
KU538_RS12460 (KU538_12370)	-	2534764..2534972 (-)	209	Protein_2437	hypothetical protein	-
KU538_RS12465 (KU538_12375)	-	2535150..2535731 (+)	582	WP_000158385.1	histidine phosphatase family protein	-

Sequence

Protein

• Length: 167 a.a.
• Molecular weight: 18539.12 Da
• Isoelectric Point: 4.7305

>NTDB_id=585226 KU538_RS12420 WP_000934799.1 2530367..2530870(+) (ssbA) [Staphylococcus aureus strain 202]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF

Nucleotide

• Length: 504 bp

>NTDB_id=585226 KU538_RS12420 WP_000934799.1 2530367..2530870(+) (ssbA) [Staphylococcus aureus strain 202]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A7U7IE99

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	65.341	100	0.689
ssb	Latilactobacillus sakei subsp. sakei 23K	54.971	100	0.563
ssbB	Bacillus subtilis subsp. subtilis str. 168	58.491	63.473	0.371
ssb	Glaesserella parasuis strain SC1401	34.463	100	0.365