Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | KU507_RS00410 | Genome accession | NZ_CP077885 |
| Coordinates | 76931..77434 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain 355 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 72868..97985 | 76931..77434 | within | 0 |
Gene organization within MGE regions
Location: 72868..97985
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KU507_RS00380 (KU507_00375) | - | 72868..73713 (+) | 846 | WP_001550052.1 | ParB/RepB/Spo0J family partition protein | - |
| KU507_RS00385 (KU507_00380) | - | 73870..74751 (+) | 882 | WP_001077602.1 | mechanosensitive ion channel family protein | - |
| KU507_RS00390 (KU507_00385) | - | 74781..74984 (+) | 204 | WP_000157345.1 | DUF951 domain-containing protein | - |
| KU507_RS00395 (KU507_00390) | ychF | 74996..76093 (+) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| KU507_RS00400 (KU507_00395) | - | 76179..76370 (-) | 192 | WP_001052483.1 | hypothetical protein | - |
| KU507_RS00405 (KU507_00400) | rpsF | 76614..76910 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| KU507_RS00410 (KU507_00405) | ssbA | 76931..77434 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| KU507_RS00415 (KU507_00410) | rpsR | 77486..77728 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| KU507_RS00420 (KU507_00415) | - | 77910..78740 (-) | 831 | WP_000357934.1 | KilA-N domain-containing protein | - |
| KU507_RS00425 (KU507_00420) | - | 79223..80440 (-) | 1218 | WP_000270129.1 | tyrosine-type recombinase/integrase | - |
| KU507_RS00430 (KU507_00425) | - | 80703..81428 (-) | 726 | WP_000668215.1 | helix-turn-helix domain-containing protein | - |
| KU507_RS00435 (KU507_00430) | - | 81600..81812 (+) | 213 | WP_001245562.1 | helix-turn-helix domain-containing protein | - |
| KU507_RS00440 (KU507_00435) | - | 81813..82085 (+) | 273 | WP_001138300.1 | helix-turn-helix domain-containing protein | - |
| KU507_RS00445 (KU507_00440) | - | 82097..82252 (+) | 156 | WP_000784886.1 | hypothetical protein | - |
| KU507_RS00450 (KU507_00445) | - | 82237..82482 (+) | 246 | WP_001171847.1 | hypothetical protein | - |
| KU507_RS00455 (KU507_00450) | - | 82442..82825 (+) | 384 | WP_000403843.1 | hypothetical protein | - |
| KU507_RS00460 (KU507_00455) | tscT | 82826..83125 (+) | 300 | WP_048665656.1 | type II toxin-antitoxin system toxin TscT | - |
| KU507_RS00465 (KU507_00460) | - | 83200..84816 (+) | 1617 | WP_050956491.1 | hypothetical protein | - |
| KU507_RS00470 (KU507_00465) | - | 84992..85795 (+) | 804 | WP_000148373.1 | bifunctional DNA primase/polymerase | - |
| KU507_RS00475 (KU507_00470) | - | 85782..86054 (+) | 273 | WP_001149389.1 | hypothetical protein | - |
| KU507_RS00480 (KU507_00475) | - | 86056..86697 (+) | 642 | WP_050956490.1 | pathogenicity island protein | - |
| KU507_RS00485 (KU507_00480) | - | 87271..87612 (+) | 342 | WP_001161659.1 | hypothetical protein | - |
| KU507_RS00490 (KU507_00485) | - | 87624..88202 (+) | 579 | WP_000846292.1 | hypothetical protein | - |
| KU507_RS00495 (KU507_00490) | - | 88220..88438 (+) | 219 | WP_000448775.1 | capsid morphogenesis B protein | - |
| KU507_RS00500 (KU507_00495) | - | 88489..89016 (+) | 528 | WP_000771356.1 | spore coat protein | - |
| KU507_RS00505 (KU507_00500) | - | 89019..89360 (+) | 342 | WP_000358778.1 | hypothetical protein | - |
| KU507_RS00510 (KU507_00505) | - | 89357..89926 (+) | 570 | WP_001293072.1 | terminase small subunit | - |
| KU507_RS00515 (KU507_00510) | - | 90001..90360 (-) | 360 | WP_000935290.1 | hypothetical protein | - |
| KU507_RS00520 (KU507_00515) | - | 90477..90866 (-) | 390 | WP_000362902.1 | hypothetical protein | - |
| KU507_RS00525 (KU507_00520) | - | 90868..92079 (-) | 1212 | WP_009558370.1 | hypothetical protein | - |
| KU507_RS00530 (KU507_00525) | - | 92172..92501 (+) | 330 | WP_412072694.1 | DUF1433 domain-containing protein | - |
| KU507_RS00535 (KU507_00530) | - | 92616..93059 (+) | 444 | WP_000022885.1 | GNAT family N-acetyltransferase | - |
| KU507_RS00540 (KU507_00535) | - | 93599..94537 (-) | 939 | WP_001822249.1 | Abi family protein | - |
| KU507_RS00545 (KU507_00540) | - | 94576..95277 (-) | 702 | Protein_108 | tyrosine-type recombinase/integrase | - |
| KU507_RS00550 (KU507_00545) | selX | 95483..96094 (+) | 612 | WP_000475326.1 | staphylococcal enterotoxin-like toxin X | - |
| KU507_RS00555 (KU507_00550) | - | 96463..96831 (+) | 369 | WP_000849177.1 | YxeA family protein | - |
| KU507_RS00560 (KU507_00555) | - | 97012..97584 (+) | 573 | WP_000769720.1 | PepSY domain-containing protein | - |
| KU507_RS00565 (KU507_00560) | - | 97722..97985 (-) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=584512 KU507_RS00410 WP_000934799.1 76931..77434(+) (ssbA) [Staphylococcus aureus strain 355]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=584512 KU507_RS00410 WP_000934799.1 76931..77434(+) (ssbA) [Staphylococcus aureus strain 355]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |