Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | KU497_RS11345 | Genome accession | NZ_CP077880 |
| Coordinates | 2202617..2203120 (-) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain 356 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2182066..2207183 | 2202617..2203120 | within | 0 |
Gene organization within MGE regions
Location: 2182066..2207183
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KU497_RS11190 (KU497_11165) | - | 2182066..2182329 (+) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| KU497_RS11195 (KU497_11170) | - | 2182467..2183039 (-) | 573 | WP_000769720.1 | PepSY domain-containing protein | - |
| KU497_RS11200 (KU497_11175) | - | 2183220..2183588 (-) | 369 | WP_000849177.1 | YxeA family protein | - |
| KU497_RS11205 (KU497_11180) | selX | 2183957..2184568 (-) | 612 | WP_000475326.1 | staphylococcal enterotoxin-like toxin X | - |
| KU497_RS11210 (KU497_11185) | - | 2184774..2185475 (+) | 702 | Protein_2163 | tyrosine-type recombinase/integrase | - |
| KU497_RS11215 (KU497_11190) | - | 2185514..2186452 (+) | 939 | WP_001822249.1 | Abi family protein | - |
| KU497_RS11220 (KU497_11195) | - | 2186992..2187435 (-) | 444 | WP_000022885.1 | GNAT family N-acetyltransferase | - |
| KU497_RS11225 (KU497_11200) | - | 2187550..2187879 (-) | 330 | WP_412072694.1 | DUF1433 domain-containing protein | - |
| KU497_RS11230 (KU497_11205) | - | 2187972..2189183 (+) | 1212 | WP_009558370.1 | hypothetical protein | - |
| KU497_RS11235 (KU497_11210) | - | 2189185..2189574 (+) | 390 | WP_000362902.1 | hypothetical protein | - |
| KU497_RS11240 (KU497_11215) | - | 2189691..2190050 (+) | 360 | WP_000935290.1 | hypothetical protein | - |
| KU497_RS11245 (KU497_11220) | - | 2190125..2190694 (-) | 570 | WP_001293072.1 | terminase small subunit | - |
| KU497_RS11250 (KU497_11225) | - | 2190691..2191032 (-) | 342 | WP_000358778.1 | hypothetical protein | - |
| KU497_RS11255 (KU497_11230) | - | 2191035..2191562 (-) | 528 | WP_000771356.1 | spore coat protein | - |
| KU497_RS11260 (KU497_11235) | - | 2191613..2191831 (-) | 219 | WP_000448775.1 | capsid morphogenesis B protein | - |
| KU497_RS11265 (KU497_11240) | - | 2191849..2192427 (-) | 579 | WP_000846292.1 | hypothetical protein | - |
| KU497_RS11270 (KU497_11245) | - | 2192439..2192780 (-) | 342 | WP_001161659.1 | hypothetical protein | - |
| KU497_RS11275 (KU497_11250) | - | 2193354..2193995 (-) | 642 | WP_050956490.1 | pathogenicity island protein | - |
| KU497_RS11280 (KU497_11255) | - | 2193997..2194269 (-) | 273 | WP_001149389.1 | hypothetical protein | - |
| KU497_RS11285 (KU497_11260) | - | 2194256..2195059 (-) | 804 | WP_000148373.1 | bifunctional DNA primase/polymerase | - |
| KU497_RS11290 (KU497_11265) | - | 2195235..2196851 (-) | 1617 | WP_050956491.1 | hypothetical protein | - |
| KU497_RS11295 (KU497_11270) | tscT | 2196926..2197225 (-) | 300 | WP_048665656.1 | type II toxin-antitoxin system toxin TscT | - |
| KU497_RS11300 (KU497_11275) | - | 2197226..2197609 (-) | 384 | WP_000403843.1 | hypothetical protein | - |
| KU497_RS11305 (KU497_11280) | - | 2197569..2197814 (-) | 246 | WP_001171847.1 | hypothetical protein | - |
| KU497_RS11310 (KU497_11285) | - | 2197799..2197954 (-) | 156 | WP_000784886.1 | hypothetical protein | - |
| KU497_RS11315 (KU497_11290) | - | 2197966..2198238 (-) | 273 | WP_001138300.1 | helix-turn-helix domain-containing protein | - |
| KU497_RS11320 (KU497_11295) | - | 2198239..2198451 (-) | 213 | WP_001245562.1 | helix-turn-helix domain-containing protein | - |
| KU497_RS11325 (KU497_11300) | - | 2198623..2199348 (+) | 726 | WP_000668215.1 | helix-turn-helix domain-containing protein | - |
| KU497_RS11330 (KU497_11305) | - | 2199611..2200828 (+) | 1218 | WP_000270129.1 | tyrosine-type recombinase/integrase | - |
| KU497_RS11335 (KU497_11310) | - | 2201311..2202141 (+) | 831 | WP_000357934.1 | KilA-N domain-containing protein | - |
| KU497_RS11340 (KU497_11315) | rpsR | 2202323..2202565 (-) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| KU497_RS11345 (KU497_11320) | ssbA | 2202617..2203120 (-) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| KU497_RS11350 (KU497_11325) | rpsF | 2203141..2203437 (-) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| KU497_RS11355 (KU497_11330) | - | 2203681..2203872 (+) | 192 | WP_001052483.1 | hypothetical protein | - |
| KU497_RS11360 (KU497_11335) | ychF | 2203958..2205055 (-) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| KU497_RS11365 (KU497_11340) | - | 2205067..2205270 (-) | 204 | WP_000157345.1 | DUF951 domain-containing protein | - |
| KU497_RS11370 (KU497_11345) | - | 2205300..2206181 (-) | 882 | WP_001077602.1 | mechanosensitive ion channel family protein | - |
| KU497_RS11375 (KU497_11350) | - | 2206338..2207183 (-) | 846 | WP_001550052.1 | ParB/RepB/Spo0J family partition protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=584505 KU497_RS11345 WP_000934799.1 2202617..2203120(-) (ssbA) [Staphylococcus aureus strain 356]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=584505 KU497_RS11345 WP_000934799.1 2202617..2203120(-) (ssbA) [Staphylococcus aureus strain 356]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |