Detailed information    

insolico Bioinformatically predicted

Overview


Name   micB   Type   Regulator
Locus tag   I872_RS05705 Genome accession   NC_021175
Coordinates   1145613..1146977 (-) Length   454 a.a.
NCBI ID   WP_015605197.1    Uniprot ID   -
Organism   Streptococcus cristatus AS 1.3089     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1140613..1151977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I872_RS05690 (I872_05715) rnc 1143318..1144004 (-) 687 WP_015605194.1 ribonuclease III -
  I872_RS05695 (I872_05720) - 1144149..1144508 (-) 360 WP_015605195.1 YbaN family protein -
  I872_RS05700 (I872_05725) vicX 1144820..1145620 (-) 801 WP_015605196.1 MBL fold metallo-hydrolase Regulator
  I872_RS05705 (I872_05730) micB 1145613..1146977 (-) 1365 WP_015605197.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I872_RS05710 (I872_05735) micA 1146970..1147671 (-) 702 WP_015605198.1 response regulator YycF Regulator
  I872_RS05715 (I872_05740) - 1147934..1149016 (+) 1083 WP_015605199.1 M24 family metallopeptidase -
  I872_RS05720 (I872_05745) - 1149092..1149571 (-) 480 WP_041826807.1 hypothetical protein -
  I872_RS05725 (I872_05750) - 1149841..1150290 (-) 450 WP_015605201.1 Rrf2 family transcriptional regulator -
  I872_RS05735 (I872_05760) - 1150790..1151632 (-) 843 WP_015605203.1 metallophosphoesterase family protein -

Sequence


Protein


Download         Length: 454 a.a.        Molecular weight: 51614.58 Da        Isoelectric Point: 4.5423

>NTDB_id=58450 I872_RS05705 WP_015605197.1 1145613..1146977(-) (micB) [Streptococcus cristatus AS 1.3089]
MIEKIKEFVLSPDFVFSLIVVGFIIVVALLLLENRRDTRKLVQLNQKIKGLIAGDYSEVLDMQGSPEITDMTNSINDLSE
VIRLTHENLEQETKRLSSILSYMTDGVLATNRRGQIITINDMATKQLGVKRDDVLNTSILDLLDIADEYDLRELITNVPE
LTIDSQDENGEYVSLRVRFALIRRESGFISGLVAVLHDTTEQDKEERERRLFVSNVSHELRTPLTSVKSYLEALDDGALS
EPVAPEFVKVSLTETNRMMRMVTDLLSLSRIDNNTSHLDVELTNFTAFITYILNRFDKIKNQDETKKYEIIRDYSITPIW
VEIDTDKMTQVIDNIMNNAIKYSPDGGTITVSVRTTDVQLILSISDEGLGIPKQDLPKIFDRFYRVDKARSRAQGGTGLG
LAIAKEIIKQHHGFIWAKSEYGKGSTFTIVLPYDNDAVRVDDWENEENVESEHD

Nucleotide


Download         Length: 1365 bp        

>NTDB_id=58450 I872_RS05705 WP_015605197.1 1145613..1146977(-) (micB) [Streptococcus cristatus AS 1.3089]
ATGATTGAAAAAATAAAAGAGTTTGTTCTGTCTCCTGACTTTGTCTTTTCACTGATCGTTGTCGGCTTTATCATCGTTGT
AGCCCTCTTGCTGCTGGAAAATCGACGGGATACTCGAAAACTGGTCCAATTAAATCAAAAGATTAAAGGCTTGATTGCAG
GAGATTATTCAGAAGTTTTAGATATGCAGGGAAGTCCTGAAATCACGGATATGACCAATTCTATCAATGATCTTTCTGAA
GTCATTCGCCTGACGCATGAAAATTTGGAGCAAGAGACCAAGCGTCTATCCAGCATCCTGTCTTACATGACGGATGGCGT
ACTTGCGACCAACCGTCGAGGACAGATTATCACTATCAATGACATGGCGACCAAGCAGCTGGGGGTCAAACGTGATGATG
TGCTTAATACTAGTATTTTAGATTTGCTGGATATTGCTGATGAGTACGATTTGCGCGAATTGATTACCAATGTTCCAGAA
TTGACCATTGATTCTCAAGATGAAAATGGCGAATACGTAAGCCTGCGGGTTCGGTTTGCCTTGATTAGACGGGAGTCAGG
TTTTATATCAGGGTTGGTAGCAGTGCTGCACGATACAACGGAGCAAGACAAGGAAGAACGGGAGCGTCGGCTTTTCGTTT
CCAATGTTAGCCATGAATTGCGGACGCCTCTAACCAGTGTAAAATCCTATCTGGAAGCCTTGGATGATGGTGCTCTGTCA
GAGCCTGTTGCACCGGAATTTGTCAAAGTTTCACTAACTGAGACAAACCGGATGATGCGGATGGTGACGGACTTACTTAG
CTTATCGCGGATTGATAATAATACCAGCCATCTGGACGTTGAGCTGACTAATTTTACGGCCTTTATCACCTATATCCTTA
ACCGTTTTGATAAGATTAAAAATCAGGATGAGACCAAAAAATATGAGATTATCAGGGATTATTCAATTACGCCGATTTGG
GTAGAGATTGATACGGATAAGATGACTCAGGTTATTGATAATATCATGAACAATGCCATCAAGTATTCACCTGATGGTGG
GACGATTACGGTTTCTGTGAGGACAACAGATGTTCAGTTGATTCTTTCGATTTCGGATGAAGGTTTGGGCATTCCCAAGC
AGGATCTGCCAAAGATTTTTGATCGTTTCTATCGGGTGGATAAGGCCCGCAGTCGAGCCCAGGGAGGAACGGGCTTGGGT
CTGGCTATTGCTAAAGAAATTATCAAGCAGCATCATGGCTTTATCTGGGCTAAGAGCGAGTACGGTAAGGGTTCTACCTT
TACCATCGTCCTTCCTTATGATAATGATGCTGTCCGTGTAGATGACTGGGAAAATGAAGAGAATGTAGAAAGTGAACATG
ACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  micB Streptococcus pneumoniae Cp1015

78.36

96.696

0.758

  vicK Streptococcus mutans UA159

71.393

88.546

0.632


Multiple sequence alignment