Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | KU513_RS09225 | Genome accession | NZ_CP077872 |
| Coordinates | 1792243..1792746 (-) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain 358 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1771692..1796809 | 1792243..1792746 | within | 0 |
Gene organization within MGE regions
Location: 1771692..1796809
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KU513_RS09070 (KU513_09050) | - | 1771692..1771955 (+) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| KU513_RS09075 (KU513_09055) | - | 1772093..1772665 (-) | 573 | WP_000769720.1 | PepSY domain-containing protein | - |
| KU513_RS09080 (KU513_09060) | - | 1772846..1773214 (-) | 369 | WP_000849177.1 | YxeA family protein | - |
| KU513_RS09085 (KU513_09065) | selX | 1773583..1774194 (-) | 612 | WP_000475326.1 | staphylococcal enterotoxin-like toxin X | - |
| KU513_RS09090 (KU513_09070) | - | 1774400..1775101 (+) | 702 | Protein_1749 | tyrosine-type recombinase/integrase | - |
| KU513_RS09095 (KU513_09075) | - | 1775140..1776078 (+) | 939 | WP_001822249.1 | Abi family protein | - |
| KU513_RS09100 (KU513_09080) | - | 1776618..1777061 (-) | 444 | WP_000022885.1 | GNAT family N-acetyltransferase | - |
| KU513_RS09105 (KU513_09085) | - | 1777176..1777571 (-) | 396 | WP_150820270.1 | DUF1433 domain-containing protein | - |
| KU513_RS09110 (KU513_09090) | - | 1777598..1778809 (+) | 1212 | WP_009558370.1 | hypothetical protein | - |
| KU513_RS09115 (KU513_09095) | - | 1778811..1779200 (+) | 390 | WP_000362902.1 | hypothetical protein | - |
| KU513_RS09120 (KU513_09100) | - | 1779317..1779676 (+) | 360 | WP_000935290.1 | hypothetical protein | - |
| KU513_RS09125 (KU513_09105) | - | 1779751..1780320 (-) | 570 | WP_001293072.1 | terminase small subunit | - |
| KU513_RS09130 (KU513_09110) | - | 1780317..1780658 (-) | 342 | WP_000358778.1 | hypothetical protein | - |
| KU513_RS09135 (KU513_09115) | - | 1780661..1781188 (-) | 528 | WP_000771356.1 | spore coat protein | - |
| KU513_RS09140 (KU513_09120) | - | 1781239..1781457 (-) | 219 | WP_000448775.1 | capsid morphogenesis B protein | - |
| KU513_RS09145 (KU513_09125) | - | 1781475..1782053 (-) | 579 | WP_000846292.1 | hypothetical protein | - |
| KU513_RS09150 (KU513_09130) | - | 1782065..1782406 (-) | 342 | WP_001161659.1 | hypothetical protein | - |
| KU513_RS09155 (KU513_09135) | - | 1782980..1783621 (-) | 642 | WP_050956490.1 | pathogenicity island protein | - |
| KU513_RS09160 (KU513_09140) | - | 1783623..1783895 (-) | 273 | WP_001149389.1 | hypothetical protein | - |
| KU513_RS09165 (KU513_09145) | - | 1783882..1784685 (-) | 804 | WP_000148373.1 | bifunctional DNA primase/polymerase | - |
| KU513_RS09170 (KU513_09150) | - | 1784861..1786477 (-) | 1617 | WP_050956491.1 | hypothetical protein | - |
| KU513_RS09175 (KU513_09155) | tscT | 1786552..1786851 (-) | 300 | WP_048665656.1 | type II toxin-antitoxin system toxin TscT | - |
| KU513_RS09180 (KU513_09160) | - | 1786852..1787235 (-) | 384 | WP_000403843.1 | hypothetical protein | - |
| KU513_RS09185 (KU513_09165) | - | 1787195..1787440 (-) | 246 | WP_001171847.1 | hypothetical protein | - |
| KU513_RS09190 (KU513_09170) | - | 1787425..1787580 (-) | 156 | WP_000784886.1 | hypothetical protein | - |
| KU513_RS09195 (KU513_09175) | - | 1787592..1787864 (-) | 273 | WP_001138300.1 | helix-turn-helix domain-containing protein | - |
| KU513_RS09200 (KU513_09180) | - | 1787865..1788077 (-) | 213 | WP_001245562.1 | helix-turn-helix domain-containing protein | - |
| KU513_RS09205 (KU513_09185) | - | 1788249..1788974 (+) | 726 | WP_000668215.1 | helix-turn-helix domain-containing protein | - |
| KU513_RS09210 (KU513_09190) | - | 1789237..1790454 (+) | 1218 | WP_000270129.1 | tyrosine-type recombinase/integrase | - |
| KU513_RS09215 (KU513_09195) | - | 1790937..1791767 (+) | 831 | WP_000357934.1 | KilA-N domain-containing protein | - |
| KU513_RS09220 (KU513_09200) | rpsR | 1791949..1792191 (-) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| KU513_RS09225 (KU513_09205) | ssbA | 1792243..1792746 (-) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| KU513_RS09230 (KU513_09210) | rpsF | 1792767..1793063 (-) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| KU513_RS09235 (KU513_09215) | - | 1793307..1793498 (+) | 192 | WP_001052483.1 | hypothetical protein | - |
| KU513_RS09240 (KU513_09220) | ychF | 1793584..1794681 (-) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| KU513_RS09245 (KU513_09225) | - | 1794693..1794896 (-) | 204 | WP_000157345.1 | DUF951 domain-containing protein | - |
| KU513_RS09250 (KU513_09230) | - | 1794926..1795807 (-) | 882 | WP_001077602.1 | mechanosensitive ion channel family protein | - |
| KU513_RS09255 (KU513_09235) | - | 1795964..1796809 (-) | 846 | WP_001550052.1 | ParB/RepB/Spo0J family partition protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=584416 KU513_RS09225 WP_000934799.1 1792243..1792746(-) (ssbA) [Staphylococcus aureus strain 358]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=584416 KU513_RS09225 WP_000934799.1 1792243..1792746(-) (ssbA) [Staphylococcus aureus strain 358]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |