Detailed information NTG0583386

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: KU058_RS16290
• Genome accession: NZ_CP077830
• Coordinates: 3276522..3277640 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain DETAB-E51
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3271522..3282640

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KU058_RS16280 (KU058_16205)	-	3274638..3275330 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
KU058_RS16285 (KU058_16210)	pilT	3275457..3276494 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
KU058_RS16290 (KU058_16215)	pilU	3276522..3277640 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
KU058_RS16295 (KU058_16220)	fur	3277710..3278147 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
KU058_RS16300 (KU058_16225)	bamE	3278259..3278657 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
KU058_RS16305 (KU058_16230)	-	3278712..3279035 (-)	324	WP_000442587.1	RnfH family protein	-
KU058_RS16310 (KU058_16235)	-	3279035..3280102 (-)	1068	WP_002019572.1	hypothetical protein	-
KU058_RS16315 (KU058_16240)	-	3280255..3280710 (-)	456	WP_000782976.1	bacteriohemerythrin	-
KU058_RS16320 (KU058_16245)	-	3280963..3281811 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=583386 KU058_RS16290 WP_000347039.1 3276522..3277640(+) (pilU) [Acinetobacter baumannii strain DETAB-E51]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=583386 KU058_RS16290 WP_000347039.1 3276522..3277640(+) (pilU) [Acinetobacter baumannii strain DETAB-E51]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395