Detailed information NTG0058312

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: EP178_RS04405
• Genome accession: NZ_AP018377
• Coordinates: 755995..757026 (-)
• Length: 343 a.a.
• NCBI ID: WP_003688673.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain FC428
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 750995..762026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EP178_RS04375 (NgFC428_00762)	-	752208..752822 (+)	615	WP_047917856.1	molybdenum cofactor guanylyltransferase	-
EP178_RS04380 (NgFC428_00763)	-	752985..753602 (+)	618	WP_010358100.1	riboflavin synthase	-
EP178_RS04385	-	753610..754474 (+)	865	Protein_759	ATP-binding protein	-
EP178_RS04390 (NgFC428_00766)	-	754487..754921 (-)	435	WP_003688677.1	Spy/CpxP family protein refolding chaperone	-
EP178_RS04395 (NgFC428_00767)	rpe	755067..755750 (+)	684	WP_003688675.1	ribulose-phosphate 3-epimerase	-
EP178_RS04405 (NgFC428_00768)	ruvB	755995..757026 (-)	1032	WP_003688673.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
EP178_RS04410 (NgFC428_00769)	-	757108..757416 (-)	309	WP_003688671.1	hypothetical protein	-
EP178_RS04420 (NgFC428_00770)	-	757835..759067 (-)	1233	WP_003702731.1	multifunctional CCA addition/repair protein	-
EP178_RS04425 (NgFC428_00771)	-	759146..760774 (-)	1629	WP_010951119.1	ABC-F family ATPase	-
EP178_RS04430 (NgFC428_00772)	-	760924..761298 (+)	375	WP_003688664.1	arsenate reductase	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37696.27 Da
• Isoelectric Point: 5.2932

>NTDB_id=58312 EP178_RS04405 WP_003688673.1 755995..757026(-) (ruvB) [Neisseria gonorrhoeae strain FC428]
MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQHKAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTL
AHIIAKELGVNLRQTSGPVLERAGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMDEEGAMEVAKRSRGTPRIANRLLRRVR
DFADVKNNGVIDAAVADAALSMLDVDAQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFL
QRTPRGRMATERAYLHFGLPVEK

Nucleotide

• Length: 1032 bp

>NTDB_id=58312 EP178_RS04405 WP_003688673.1 755995..757026(-) (ruvB) [Neisseria gonorrhoeae strain FC428]
ATGCTGCAAACCGACAACCTGACCGCCGCGCAACCGCAACGCATCGTTGCCGCCCAAACCGCCTCCGCACAGGAAGAACT
GCTCGAACGCGCCCTCCGCCCCAAAACGCTGGACGACTACATCGGGCAGCATAAAGCCAAAGAGCAGCTCGCCATCTTCA
TCCAAGCCGCCAAAAAACGCGGCGAAGCACTCGACCACGTCCTGCTTTTCGGCCCGCCCGGACTGGGCAAAACCACCCTT
GCCCACATCATCGCCAAAGAGTTGGGCGTAAATTTGCGCCAAACCAGCGGCCCCGTCCTCGAACGCGCCGGCGACCTCGC
CGCCCTTTTGACCAACCTTGATCCGCACGACGTATTGTTTATCGACGAAATCCACCGGCTAAGCCCCGTCGTCGAGGAAA
TCCTCTATCCCGCGCTCGAAGACTACCGGCTCGACATTATGATAGGCGAAGGACCCGCCGCACGTTCCGTCAAAATCGAC
CTGCCGCCCTTCACCCTCGTCGGCGCGACCACCCGCGCCGGTATGCTGACCAACCCGTTGCGCGACCGCTTCGGCATCGT
CTCCCGCCTCGAGTTTTACGAAAACCGCGACCTTACCACCATCGTCAGCCGTTCGGCACAACTGTTGCAGCTCGATATGG
ACGAAGAAGGCGCGATGGAAGTCGCCAAACGCAGCCGCGGCACGCCCCGCATCGCCAACCGCCTGTTGCGCCGCGTGCGC
GATTTCGCCGACGTGAAAAACAACGGCGTAATCGATGCCGCCGTCGCCGATGCCGCTTTAAGTATGCTGGACGTGGACGC
GCAGGGGCTGGACGTGATGGACAGGAAATTCCTCGAAGCCGTTTTGCACAAATTCGGCGGCGGCCCCGTCGGTTTGGACA
ACGTTGCCGCCGCCATCGGCGAATCTACGGACACCATCGAAGACGTTATCGAACCCTACCTCATCCAACAAGGCTTTTTG
CAACGCACCCCGCGCGGCAGGATGGCGACCGAACGCGCCTACCTGCATTTCGGGCTGCCCGTCGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (268-337)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (32-190)

• RuvB AAA lid domain (AAA_lid_4) (193-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.856	95.335	0.58
ruvB	Streptococcus pneumoniae TIGR4	62.739	91.545	0.574
ruvB	Streptococcus pneumoniae R6	62.739	91.545	0.574
ruvB	Streptococcus pneumoniae D39	62.739	91.545	0.574
ruvB	Synechocystis sp. PCC 6803	54.268	95.627	0.519
ruvB	Helicobacter pylori 26695	56.55	91.254	0.516