Detailed information NTG0582962

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MWN28_RS23530
• Genome accession: NZ_CP095448
• Coordinates: 4852884..4853909 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain LS45
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4847884..4858909

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MWN28_RS23510 (MWN28_23510)	metJ	4849069..4849386 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MWN28_RS23515 (MWN28_23515)	yiiX	4849446..4850054 (+)	609	WP_000702304.1	YiiX family permuted papain-like enzyme	-
MWN28_RS23520 (MWN28_23520)	rpmE	4850115..4850327 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MWN28_RS23525 (MWN28_23525)	priA	4850530..4852728 (+)	2199	WP_012311784.1	primosomal protein N'	Machinery gene
MWN28_RS23530 (MWN28_23530)	cytR	4852884..4853909 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MWN28_RS23535 (MWN28_23535)	ftsN	4854000..4854959 (+)	960	WP_000068834.1	cell division protein FtsN	-
MWN28_RS23540 (MWN28_23540)	hslV	4855052..4855582 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MWN28_RS23545 (MWN28_23545)	hslU	4855592..4856923 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MWN28_RS23550 (MWN28_23550)	menA	4856990..4857916 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MWN28_RS23555 (MWN28_23555)	rraA	4858009..4858494 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=582962 MWN28_RS23530 WP_000644904.1 4852884..4853909(+) (cytR) [Escherichia coli strain LS45]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=582962 MWN28_RS23530 WP_000644904.1 4852884..4853909(+) (cytR) [Escherichia coli strain LS45]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAGCACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628