Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   I6L26_RS01555 Genome accession   NZ_CP077303
Coordinates   325243..326376 (-) Length   377 a.a.
NCBI ID   WP_002114040.1    Uniprot ID   K9CH03
Organism   Acinetobacter pittii strain FDAARGOS 1396     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 320243..331376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L26_RS01530 (I6L26_01530) yeaM 320416..321180 (-) 765 WP_002114047.1 AraC family transcriptional regulator -
  I6L26_RS01535 (I6L26_01535) nepI 321202..322416 (-) 1215 WP_002114107.1 MFS transporter -
  I6L26_RS01540 (I6L26_01540) - 322552..323205 (+) 654 WP_078210243.1 TetR/AcrR family transcriptional regulator -
  I6L26_RS01545 (I6L26_01545) - 323309..324229 (+) 921 WP_002114137.1 DMT family transporter -
  I6L26_RS01550 (I6L26_01550) yrdC 324622..325191 (-) 570 WP_002114056.1 L-threonylcarbamoyladenylate synthase -
  I6L26_RS01555 (I6L26_01555) dprA 325243..326376 (-) 1134 WP_002114040.1 DNA-processing protein DprA Machinery gene
  I6L26_RS01560 (I6L26_01560) tsaP 326397..327551 (-) 1155 WP_002114134.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  I6L26_RS01565 (I6L26_01565) def 327674..328204 (+) 531 WP_002114101.1 peptide deformylase -
  I6L26_RS01570 (I6L26_01570) - 328248..328673 (+) 426 WP_002114087.1 DUF2946 family protein -
  I6L26_RS01575 (I6L26_01575) oprC 328746..330860 (+) 2115 WP_002114079.1 TonB-dependent copper receptor -
  I6L26_RS01580 (I6L26_01580) - 330914..331120 (+) 207 WP_002114054.1 hypothetical protein -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 41981.56 Da        Isoelectric Point: 6.6297

>NTDB_id=580678 I6L26_RS01555 WP_002114040.1 325243..326376(-) (dprA) [Acinetobacter pittii strain FDAARGOS 1396]
MLTQLYSHHYHTLKVWYLVQHSLVSFKKIVDYFGSCEKAVQPAELSQWRNLGLHANHLKRVDEFQTAQGQAQFKKLTEQI
QQYTDFILTADDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDSTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQNSTEEAVVSSTPEI
PEHLINLYQSLDWVGQNIDQLVLHHSQPVAELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=580678 I6L26_RS01555 WP_002114040.1 325243..326376(-) (dprA) [Acinetobacter pittii strain FDAARGOS 1396]
ATGCTTACTCAACTTTATTCACACCATTACCACACGCTTAAAGTGTGGTATTTGGTGCAACACTCTTTAGTCAGCTTTAA
AAAAATTGTCGATTATTTTGGTAGCTGTGAAAAGGCGGTCCAACCTGCTGAATTATCTCAATGGCGCAATCTCGGGTTAC
ATGCTAATCATTTAAAACGCGTAGATGAATTTCAAACTGCTCAGGGTCAAGCTCAGTTTAAAAAACTAACTGAGCAAATC
CAGCAATATACCGACTTTATTTTAACGGCAGATGACTCAGGCTATCCCACTCAGTTATTACCTTATACAGATCACCCACC
TATCATTTTTGGAAAAGGTCAGGCACAAGCCCTATTACAACCACAAATTGCGATTGTAGGTAGCCGAAAACCAAGCCCAC
ATGGTCGTCAGGTTGCTTATGATTTTGCCTATTACTTAAGTGAAAAAGGTTTTTATGTGAGTAGTGGCTTGGCATATGGG
ATTGATGAAGCTGCTCACCAAGGAGCATCAGCACATCAACGTACAATTGCAGTAACAGGAACTGGTTTAGACAGTACCTA
CCCTGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCGATTATTACTGAGTTTTTGCCTGGGACAC
CTCCACTACAACAGCATTTCCCACGTAGAAACCGAATTGTTAGCGGTTTGAGTTTAGGCGTGTTAGTGGTAGAAGCTACC
TTAAAAAGTGGTTCTCTCATCACTGCGAACAAAGCTGCCGAACAAGGTAAGACTGTATTTGCCATTCCTGGTCATATTTA
CAGTGAGTTTCATCAAGGTTGCCATCAACTTATTCGTGAGGGAGCAATTTTAGTCGATCATCCTGAACAAATTATTGAAG
ACCTTGCTTTACCCACTCAGTGGCAAAGTCAGCAACAAAACTCCACCGAGGAGGCTGTAGTTTCTAGTACCCCAGAAATT
CCTGAGCATTTAATTAACCTTTATCAATCTTTAGACTGGGTCGGACAAAATATTGATCAGCTTGTCTTACATCACTCTCA
GCCTGTTGCAGAACTCACCTCTTCACTGATGGAACTAGAACTACTTGGTTTATGTATGCAACAATCAGGATTGTATTTAC
GTTGTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB K9CH03

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

90.451

100

0.905

  dprA Acinetobacter baumannii strain A118

89.92

100

0.899

  dprA Acinetobacter baylyi ADP1

70.604

100

0.714

  dprA Vibrio cholerae strain A1552

43.228

92.042

0.398