Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   MUA93_RS01925 Genome accession   NZ_CP094793
Coordinates   414872..415717 (+) Length   281 a.a.
NCBI ID   WP_252549683.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6165     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 409872..420717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA93_RS01910 (MUA93_01905) - 410138..411979 (-) 1842 WP_262542158.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  MUA93_RS01915 (MUA93_01910) metC 411948..413108 (-) 1161 WP_000175848.1 cystathionine beta-lyase MetC -
  MUA93_RS01920 (MUA93_01915) - 413105..414208 (-) 1104 WP_252549686.1 PLP-dependent transferase -
  MUA93_RS01925 (MUA93_01920) spo0J 414872..415717 (+) 846 WP_252549683.1 ParB/RepB/Spo0J family partition protein Regulator
  MUA93_RS01930 (MUA93_01925) - 415871..416752 (+) 882 WP_229374250.1 mechanosensitive ion channel family protein -
  MUA93_RS01935 (MUA93_01930) - 416782..416985 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  MUA93_RS01940 (MUA93_01935) ychF 416997..418094 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  MUA93_RS01945 (MUA93_01940) - 418180..418371 (-) 192 WP_001052483.1 hypothetical protein -
  MUA93_RS01950 (MUA93_01945) rpsF 418615..418911 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  MUA93_RS01955 (MUA93_01950) ssbA 418932..419435 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  MUA93_RS01960 (MUA93_01955) rpsR 419487..419729 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32739.78 Da        Isoelectric Point: 10.0650

>NTDB_id=580083 MUA93_RS01925 WP_252549683.1 414872..415717(+) (spo0J) [Staphylococcus aureus strain IVB6165]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIAGMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=580083 MUA93_RS01925 WP_252549683.1 414872..415717(+) (spo0J) [Staphylococcus aureus strain IVB6165]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTACAAGGCTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAAAGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGGCATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAATCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(161-210)

ParB/Sulfiredoxin domain (ParB_N)

(22-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381