Detailed information NTG0578626

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: KR767_RS12895
• Genome accession: NZ_CP077072
• Coordinates: 2964716..2965879 (+)
• Length: 387 a.a.
• NCBI ID: WP_166949788.1
• Uniprot ID: A0A7X5ZJF3
• Organism: Luteibacter anthropi strain SM7.4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2959716..2970879

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KR767_RS12875 (KR767_12865)	-	2959721..2961841 (+)	2121	WP_166949780.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	-
KR767_RS12880 (KR767_12870)	-	2962126..2962701 (-)	576	WP_166949782.1	YggT family protein	-
KR767_RS12885 (KR767_12875)	proC	2962698..2963522 (-)	825	WP_250876575.1	pyrroline-5-carboxylate reductase	-
KR767_RS12890 (KR767_12880)	pilT	2963638..2964675 (+)	1038	WP_166949786.1	type IV pilus twitching motility protein PilT	Machinery gene
KR767_RS12895 (KR767_12885)	pilU	2964716..2965879 (+)	1164	WP_166949788.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
KR767_RS12900 (KR767_12890)	-	2966098..2966463 (-)	366	WP_166949790.1	BON domain-containing protein	-
KR767_RS12905 (KR767_12895)	-	2966766..2968517 (-)	1752	WP_345779876.1	hypothetical protein	-
KR767_RS12910 (KR767_12900)	-	2968651..2969577 (-)	927	WP_250876576.1	aspartate carbamoyltransferase catalytic subunit	-
KR767_RS12915 (KR767_12905)	ruvX	2969606..2970025 (-)	420	WP_166949793.1	Holliday junction resolvase RuvX	-
KR767_RS12920 (KR767_12910)	-	2970029..2970595 (-)	567	WP_250876577.1	YqgE/AlgH family protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 43381.65 Da
• Isoelectric Point: 6.9604

>NTDB_id=578626 KR767_RS12895 WP_166949788.1 2964716..2965879(+) (pilU) [Luteibacter anthropi strain SM7.4]
MSDFDFTSFLKLMVHKQASDLFITAGVAPSMKVQGRIVPITQSPLSAQQARDMVLNVMTPNQREEFEKTHECQFAISASG
IGRFRVSCFYQRNCVGMVLRRIESKIPTVDELSLPPIVKQLAMTKRGIIIFVGGTGTGKSTSLAAMIGYRNQNSTGHIIT
IEDPIEYVHRHEGCIITQRELGIDTDSWENALKNTLRQAPDVIMIGEVRTRETMEHAINFSETGHLCLCTLHANNANQAL
DRILHFFPEDRRQQLFMDLSLNLKGIVAQQLIPTPDGKARRVAVEVLLGTPLAQDYIRQGEVHKLKELMRDSNQLGMRTF
DQSLVELYHAGEISYEDALRHADSTNEVRLRIKLAQGGDAHTLSQGLEGVEIEKTDDRNGFGGILRR

Nucleotide

• Length: 1164 bp

>NTDB_id=578626 KR767_RS12895 WP_166949788.1 2964716..2965879(+) (pilU) [Luteibacter anthropi strain SM7.4]
ATGAGCGACTTCGATTTCACCTCCTTCCTCAAGCTGATGGTGCACAAACAGGCCTCCGACCTGTTCATCACCGCCGGCGT
CGCGCCTTCCATGAAGGTGCAGGGGCGTATCGTGCCCATCACCCAGAGTCCTTTGTCCGCGCAGCAGGCGCGCGACATGG
TGCTCAACGTGATGACCCCCAACCAGCGCGAGGAGTTTGAGAAAACCCACGAATGCCAGTTCGCGATCAGTGCCTCGGGT
ATCGGCCGTTTCCGCGTGTCGTGCTTCTACCAGCGCAACTGCGTGGGCATGGTGCTGCGAAGGATCGAGTCGAAGATCCC
CACCGTGGACGAGCTGAGCCTGCCGCCGATCGTGAAACAGCTGGCGATGACCAAGCGCGGCATCATCATCTTCGTGGGCG
GTACGGGTACCGGTAAGTCGACCTCGCTGGCCGCGATGATCGGCTATCGCAACCAGAATTCCACCGGTCACATCATCACC
ATCGAGGATCCCATCGAATACGTGCACCGGCACGAGGGTTGCATCATCACGCAGCGCGAACTGGGCATCGATACCGACAG
CTGGGAAAACGCGCTCAAGAACACCCTGCGCCAGGCCCCTGACGTGATCATGATCGGCGAAGTGCGCACGCGCGAGACGA
TGGAACACGCGATCAACTTCTCGGAAACCGGCCACCTTTGCCTGTGCACGCTGCATGCGAACAATGCCAACCAGGCACTG
GACCGCATCCTGCACTTCTTCCCCGAAGACCGTCGCCAGCAATTGTTCATGGATCTTTCGCTGAACCTCAAGGGCATCGT
GGCCCAGCAGCTGATTCCCACGCCGGACGGCAAGGCGCGTCGCGTGGCGGTCGAGGTGCTGCTGGGCACGCCACTGGCGC
AGGACTACATCCGCCAGGGTGAGGTGCACAAGCTGAAGGAACTGATGCGCGACTCCAACCAGCTGGGCATGCGCACGTTC
GACCAGAGCCTGGTCGAGCTGTATCACGCGGGCGAAATCAGCTACGAAGATGCGCTACGCCACGCCGACAGCACGAACGA
GGTGCGCCTGCGCATCAAGCTCGCCCAGGGCGGCGACGCACACACCCTGTCGCAGGGCCTCGAAGGCGTGGAAATTGAGA
AAACCGACGACCGCAACGGCTTCGGCGGCATCCTCCGCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (108-272)

3D structure

• AlphaFold DB: A0A7X5ZJF3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	66.578	97.416	0.649
pilU	Acinetobacter baylyi ADP1	63.483	91.99	0.584
pilU	Vibrio cholerae strain A1552	51.081	95.607	0.488