Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilM   Type   Machinery gene
Locus tag   KR767_RS09805 Genome accession   NZ_CP077072
Coordinates   2214032..2215090 (+) Length   352 a.a.
NCBI ID   WP_166950806.1    Uniprot ID   A0A7X5UD69
Organism   Luteibacter anthropi strain SM7.4     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2209032..2220090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KR767_RS09790 (KR767_09790) - 2209069..2210364 (+) 1296 WP_166950800.1 citrate synthase -
  KR767_RS09795 (KR767_09795) - 2210505..2211158 (-) 654 WP_166950802.1 hypothetical protein -
  KR767_RS09800 (KR767_09800) - 2211215..2213791 (-) 2577 WP_250878983.1 penicillin-binding protein 1A -
  KR767_RS09805 (KR767_09805) pilM 2214032..2215090 (+) 1059 WP_166950806.1 pilus assembly protein PilM Machinery gene
  KR767_RS09810 (KR767_09810) - 2215090..2215704 (+) 615 WP_166950807.1 PilN domain-containing protein -
  KR767_RS09815 (KR767_09815) pilO 2215701..2216357 (+) 657 WP_166950809.1 type 4a pilus biogenesis protein PilO -
  KR767_RS09820 (KR767_09820) - 2216354..2216881 (+) 528 WP_166950810.1 pilus assembly protein PilP -
  KR767_RS09825 (KR767_09825) - 2216902..2219163 (+) 2262 WP_250878984.1 type IV pilus secretin PilQ -

Sequence

Protein


Download         Length: 352 a.a.        Molecular weight: 37926.66 Da        Isoelectric Point: 4.5330

>NTDB_id=578622 KR767_RS09805 WP_166950806.1 2214032..2215090(+) (pilM) [Luteibacter anthropi strain SM7.4]
MGLFTPKSTPLIGVDISSTAVKLLQLSQAGGRFKVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRALARSGSKLKHASAA
VAGSAVITRVIPMSADLSEDDLEGQILVEANQYIPYPIEEVSLDFEVLGPVRDNPEMNNVLLAASRTENVDMRIAALDLG
GLTAKVIDVEAFAMENAFGMVADQLAVPREALVAMVDIGATMTTLAVLKNQRTIYSREQVFGGKQLTDEIMRRYGLSYEE
AGRAKRKGGLPESYEMEALEPFKESLVQQVSRLLQFFFAGSEYSRVDQVVLAGGCASIEGITELLEQQIGVPCVVANPLA
RMALSSRVQAQTLAQDAPALMIAVGLAMRSFD

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=578622 KR767_RS09805 WP_166950806.1 2214032..2215090(+) (pilM) [Luteibacter anthropi strain SM7.4]
GTGGGGCTCTTTACACCCAAATCGACGCCGCTCATTGGCGTCGACATAAGCTCGACCGCCGTCAAGCTGCTCCAGCTGAG
CCAGGCGGGCGGCCGCTTCAAGGTCGAGCACTACGCGGTGGAGCCCCTGCCGCCCAACGCCGTGGTTGAGAAGAACATCG
TCGAGGTGGAAGCCGTGGGCGAGGCGATCCGCCGCGCGCTGGCCCGCTCGGGCTCGAAGCTGAAGCACGCTTCGGCCGCC
GTGGCAGGCTCCGCGGTCATCACCCGCGTCATCCCCATGTCGGCCGATCTCTCCGAAGACGACCTGGAAGGCCAGATCCT
GGTGGAGGCCAACCAGTACATCCCGTACCCCATCGAGGAAGTCAGCCTCGATTTCGAGGTGCTGGGGCCGGTCCGCGACA
ACCCCGAGATGAACAATGTCCTGCTCGCGGCCTCGCGCACCGAGAACGTGGACATGCGCATCGCCGCGCTCGACCTGGGC
GGTCTCACGGCCAAGGTGATCGACGTCGAGGCGTTTGCCATGGAGAACGCCTTCGGCATGGTGGCCGACCAGCTCGCCGT
ACCGCGCGAGGCCTTGGTCGCCATGGTGGACATCGGCGCCACCATGACCACCCTGGCGGTGCTGAAGAACCAGCGCACCA
TTTATTCCCGCGAGCAGGTCTTCGGCGGCAAGCAGCTCACCGACGAGATCATGCGTCGCTACGGCCTCTCCTACGAGGAG
GCCGGTCGCGCCAAGCGCAAGGGCGGCCTGCCCGAGTCCTACGAGATGGAAGCCCTTGAGCCGTTCAAGGAGTCGCTGGT
GCAGCAGGTCAGCCGCCTGCTCCAGTTCTTCTTCGCCGGCAGCGAATACAGCCGTGTCGACCAGGTGGTGCTGGCCGGCG
GTTGCGCCTCCATCGAAGGCATCACCGAACTGCTCGAACAGCAGATCGGCGTACCGTGCGTCGTTGCCAACCCGCTCGCC
CGCATGGCCCTGTCCAGCCGCGTGCAGGCCCAGACCCTGGCCCAGGATGCTCCCGCGCTGATGATTGCCGTGGGCCTGGC
CATGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

Type IV pilus assembly protein PilM; (PilM_2)

(13-351)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7X5UD69

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilM Acinetobacter baumannii D1279779

51.42

100

0.514
  comM Acinetobacter nosocomialis M2

51.136

100

0.511
  comM Acinetobacter baylyi ADP1

50.877

97.159

0.494
  pilM Legionella pneumophila strain ERS1305867

41.36

100

0.415