Detailed information NTG0578003

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: KQ252_RS08880
• Genome accession: NZ_CP076801
• Coordinates: 1846274..1847332 (-)
• Length: 352 a.a.
• NCBI ID: WP_031950501.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain UC25604
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1841274..1852332

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQ252_RS08855 (KQ252_08840)	aroK	1841549..1842118 (-)	570	WP_045900089.1	shikimate kinase AroK	-
KQ252_RS08860 (KQ252_08845)	pilQ	1842130..1844295 (-)	2166	WP_045900087.1	type IV pilus secretin PilQ	Machinery gene
KQ252_RS08865 (KQ252_08850)	pilP	1844358..1844885 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
KQ252_RS08870 (KQ252_08855)	pilO	1844896..1845636 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
KQ252_RS08875 (KQ252_08860)	pilN	1845633..1846274 (-)	642	WP_000201223.1	PilN domain-containing protein	Machinery gene
KQ252_RS08880 (KQ252_08865)	pilM	1846274..1847332 (-)	1059	WP_031950501.1	pilus assembly protein PilM	Machinery gene
KQ252_RS08885 (KQ252_08870)	ponA	1847494..1850049 (+)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
KQ252_RS08890 (KQ252_08875)	-	1850067..1850891 (-)	825	WP_086222363.1	putative RNA methyltransferase	-
KQ252_RS08895 (KQ252_08880)	-	1850894..1851226 (-)	333	WP_000169598.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39014.55 Da
• Isoelectric Point: 4.4618

>NTDB_id=578003 KQ252_RS08880 WP_031950501.1 1846274..1847332(-) (pilM) [Acinetobacter baumannii strain UC25604]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPIGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=578003 KQ252_RS08880 WP_031950501.1 1846274..1847332(-) (pilM) [Acinetobacter baumannii strain UC25604]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATAGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCCTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423