Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   KRG72_RS04815 Genome accession   NZ_CP076703
Coordinates   956207..957535 (-) Length   442 a.a.
NCBI ID   WP_258250093.1    Uniprot ID   -
Organism   Streptococcus equinus strain S1     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 951207..962535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS04790 (KRG72_04795) - 951724..952788 (-) 1065 WP_039696865.1 BMP family protein -
  KRG72_RS04795 (KRG72_04800) deoC 952982..953647 (-) 666 WP_074560196.1 deoxyribose-phosphate aldolase -
  KRG72_RS04800 (KRG72_04805) - 954152..954742 (-) 591 WP_074867599.1 class I SAM-dependent methyltransferase -
  KRG72_RS04805 (KRG72_04810) coaA 954874..955794 (+) 921 WP_074964631.1 type I pantothenate kinase -
  KRG72_RS04810 (KRG72_04815) rpsT 955870..956121 (+) 252 WP_004231769.1 30S ribosomal protein S20 -
  KRG72_RS04815 (KRG72_04820) ciaH 956207..957535 (-) 1329 WP_258250093.1 cell wall metabolism sensor histidine kinase WalK Regulator
  KRG72_RS04820 (KRG72_04825) ciaR 957525..958199 (-) 675 WP_074563738.1 response regulator transcription factor Regulator
  KRG72_RS04825 (KRG72_04830) - 958366..960909 (-) 2544 WP_258250094.1 M1 family metallopeptidase -
  KRG72_RS04830 (KRG72_04835) phoU 961140..961793 (-) 654 WP_039696860.1 phosphate signaling complex protein PhoU -

Sequence

Protein


Download         Length: 442 a.a.        Molecular weight: 50083.97 Da        Isoelectric Point: 6.6262

>NTDB_id=577461 KRG72_RS04815 WP_258250093.1 956207..957535(-) (ciaH) [Streptococcus equinus strain S1]
MLNNIHKKLSTGTFSNFFHFFIVFTGIFIIMTTIILQIMRYGLYSSVDTTLKNAADNASDYVTRTMERSDSLQSNNSFSN
SGKGKPSSNVASLSNVSVLLYDTNGKIVNAIDAFVQFGTLASSVDEDTIGEIKDEKMTTIFGQTEKYHVLTVRVYSSDYP
TIEYATFLISVSQLDEANERYVTITVSVMIIFWMISILASIYLANWMRKPILESYEKQKRFVENASHELRTPLAVLQNRL
ESLFRRPNATILDNSESIAASLDEVRNMRILTTNLLNLARRDDGLKVELEEIQPSIFNEIFENYNMIAEENGKTFVAHNS
ADRPIKTDRTLLKQLMTILFDNAIKYTDDDGFIEFTVKTTERQTILTVADNGPGISDADKAKIFDRFYRVDKARTRQKGG
FGLGLSLAKQIVDALKGDIQVKDNHPKGTVFEVRFNRHNFGK

Nucleotide


Download         Length: 1329 bp        

>NTDB_id=577461 KRG72_RS04815 WP_258250093.1 956207..957535(-) (ciaH) [Streptococcus equinus strain S1]
ATGCTGAATAACATACACAAAAAATTATCAACAGGAACGTTTTCTAATTTTTTCCATTTCTTCATTGTATTTACAGGAAT
TTTCATCATTATGACCACGATTATCTTGCAGATTATGCGTTATGGTCTATATTCTTCTGTAGATACCACTTTAAAAAATG
CAGCTGACAACGCAAGTGATTACGTCACACGAACAATGGAGCGTAGTGATTCCTTACAATCTAATAATAGTTTTAGTAAT
TCTGGAAAAGGAAAACCCAGCTCAAATGTGGCAAGTTTAAGTAATGTCAGTGTGCTATTGTACGATACAAATGGAAAAAT
CGTAAATGCAATTGATGCGTTTGTCCAGTTCGGGACATTAGCATCTAGTGTTGATGAAGACACTATTGGTGAGATTAAAG
ACGAGAAAATGACAACTATCTTTGGTCAAACCGAAAAATACCATGTTTTAACGGTTAGAGTGTATAGTAGTGACTATCCA
ACGATTGAATACGCGACTTTCTTAATCAGTGTTAGTCAGCTTGATGAGGCAAACGAACGTTATGTAACCATAACTGTTTC
AGTCATGATTATTTTCTGGATGATTTCAATTTTAGCAAGTATTTACTTGGCAAATTGGATGCGTAAACCAATTTTAGAAA
GTTATGAAAAACAAAAGCGTTTTGTTGAAAATGCTAGTCACGAATTAAGAACGCCGTTAGCGGTGCTTCAAAATCGACTT
GAAAGTCTTTTTAGACGACCGAATGCAACAATTCTTGATAACAGTGAAAGTATTGCAGCGAGTCTTGATGAAGTTCGTAA
TATGCGTATTTTAACAACCAATCTTTTGAACCTTGCTAGGCGAGATGATGGATTGAAAGTTGAATTAGAAGAAATCCAAC
CTTCAATCTTTAATGAAATTTTTGAGAATTACAACATGATTGCCGAAGAAAATGGTAAAACTTTTGTTGCTCATAATTCT
GCGGATCGTCCGATAAAAACTGATCGCACCTTGCTTAAACAATTGATGACAATCTTGTTTGATAATGCGATTAAGTACAC
TGATGACGACGGTTTTATTGAATTTACAGTTAAAACAACAGAACGCCAGACTATTCTAACCGTCGCTGATAATGGGCCGG
GTATTAGTGACGCTGATAAAGCGAAAATTTTTGATCGCTTTTATCGCGTTGATAAGGCAAGGACACGTCAAAAAGGTGGC
TTTGGACTTGGTCTATCCTTAGCTAAACAAATTGTTGATGCCTTAAAAGGTGATATTCAAGTTAAGGATAATCATCCAAA
AGGAACTGTCTTTGAAGTTCGTTTTAACCGACATAATTTTGGTAAATAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(218-284)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(328-435)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

59.54

98.416

0.586
  ciaH Streptococcus pneumoniae Rx1

51.945

98.869

0.514
  ciaH Streptococcus pneumoniae D39

51.945

98.869

0.514
  ciaH Streptococcus pneumoniae R6

51.945

98.869

0.514
  ciaH Streptococcus pneumoniae TIGR4

51.945

98.869

0.514