Detailed information NTG0577259

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: MP387_RS08045
• Genome accession: NZ_CP094226
• Coordinates: 1664420..1665418 (-)
• Length: 332 a.a.
• NCBI ID: WP_278192508.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain 1648
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1659420..1670418

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MP387_RS08025 (MP387_08025)	eeP	1660806..1662062 (-)	1257	WP_242746205.1	RIP metalloprotease RseP	Regulator
MP387_RS08030 (MP387_08030)	-	1662078..1662881 (-)	804	WP_216732664.1	phosphatidate cytidylyltransferase	-
MP387_RS08035 (MP387_08035)	-	1662890..1663648 (-)	759	WP_242746207.1	isoprenyl transferase	-
MP387_RS08040 (MP387_08040)	-	1663855..1664439 (-)	585	WP_242746209.1	nucleotidyltransferase family protein	-
MP387_RS08045 (MP387_08045)	ruvB	1664420..1665418 (-)	999	WP_278192508.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
MP387_RS08050 (MP387_08050)	-	1666009..1666425 (-)	417	WP_242746212.1	GNAT family N-acetyltransferase	-
MP387_RS08055 (MP387_08055)	-	1666437..1667132 (-)	696	WP_242746215.1	GNAT family protein	-
MP387_RS08060 (MP387_08060)	-	1667226..1667645 (-)	420	WP_242746217.1	DUF3021 domain-containing protein	-
MP387_RS08065 (MP387_08065)	-	1667655..1668110 (-)	456	WP_242746220.1	LytTR family DNA-binding domain-containing protein	-
MP387_RS08070 (MP387_08070)	-	1668129..1668971 (-)	843	WP_242746222.1	ABC transporter permease	-
MP387_RS08075 (MP387_08075)	-	1668971..1669837 (-)	867	WP_084872443.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37240.68 Da
• Isoelectric Point: 4.4984

>NTDB_id=577259 MP387_RS08045 WP_278192508.1 1664420..1665418(-) (ruvB) [Streptococcus oralis strain 1648]
MSRILDNEIMGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMPVEEVLYSAMEDFYIDIMIGAGEGSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEMEITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGNGVID
DVITDKALTMLDIDHEGLDYVDQKILRTMIEMYGGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATAK
AYEHLGYEYSEK

Nucleotide

• Length: 999 bp

>NTDB_id=577259 MP387_RS08045 WP_278192508.1 1664420..1665418(-) (ruvB) [Streptococcus oralis strain 1648]
ATGAGTAGAATTTTAGACAATGAAATCATGGGGGATGAGGAGTTGGTAGAACGTACCCTCCGTCCTCAGTATTTACGTGA
ATATATTGGACAGGATAAGGTCAAGGACCAGCTTCAAATCTTTATTGAGGCTGCCAAAATGCGGGATGAGGCACTGGACC
ATGTTCTTTTATTTGGTCCTCCAGGTCTCGGGAAAACAACCATGGCCTTTGTTATTGCCAATGAACTGGGAGTCAATCTC
AAGCAAACGTCTGGTCCTGTCATTGAAAAAGCGGGTGATCTGGTAGCGATTTTGAATGATTTGGAGCCTGGAGACGTTCT
CTTTATTGACGAGATTCATCGCTTGCCCATGCCGGTGGAAGAGGTGCTTTATAGTGCCATGGAAGACTTCTACATTGATA
TCATGATTGGGGCTGGTGAAGGCAGTCGCAGTGTTCATTTGGACTTGCCACCATTCACCTTGATTGGTGCAACGACACGT
GCGGGGATGCTCTCAAATCCTCTGCGGGCACGTTTTGGGATTACAGGTCATATGGAATACTATGCCCACGCTGACTTGAC
AGAGATTGTTGAGCGGACAGCAGATATTTTTGAGATGGAAATCACCCATGAAGCAGCTTCGGAGTTGGCCTTACGTAGTC
GAGGAACTCCTCGTATCGCCAATCGTCTTCTCAAGCGCGTGCGCGACTTTGCCCAGATTATGGGGAATGGGGTTATCGAT
GATGTTATTACCGATAAGGCTTTGACCATGTTAGATATAGACCATGAAGGTTTGGACTATGTGGACCAGAAAATCCTTCG
CACCATGATTGAGATGTACGGTGGTGGTCCTGTCGGATTAGGAACTCTCTCCGTTAATATTGCTGAGGAGCGCGAGACGG
TCGAAGATATGTACGAACCTTACCTGATTCAAAAAGGTTTTATCATGCGGACAAGGTCTGGACGGGTGGCAACTGCTAAG
GCATATGAGCATTTGGGCTATGAATACAGTGAAAAATGA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	98.494	100	0.985
ruvB	Streptococcus pneumoniae R6	98.193	100	0.982
ruvB	Streptococcus pneumoniae D39	98.193	100	0.982
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.123	98.193	0.59
ruvB	Helicobacter pylori 26695	50.774	97.289	0.494
ruvB	Synechocystis sp. PCC 6803	49.521	94.277	0.467