Detailed information NTG0576955

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: KP808_RS03630
• Genome accession: NZ_CP076652
• Coordinates: 838026..839363 (-)
• Length: 445 a.a.
• NCBI ID: WP_230017461.1
• Uniprot ID: -
• Organism: Pseudomonas savastanoi strain MHT1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 833026..844363

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KP808_RS03620 (KP808_03590)	-	835877..836986 (-)	1110	WP_058408735.1	efflux RND transporter periplasmic adaptor subunit	-
KP808_RS03625 (KP808_03595)	-	837068..837685 (-)	618	WP_058408762.1	TetR/AcrR family transcriptional regulator	-
KP808_RS03630 (KP808_03600)	pilR	838026..839363 (-)	1338	WP_230017461.1	sigma-54 dependent transcriptional regulator	Regulator
KP808_RS03635 (KP808_03605)	pilS	839366..840958 (-)	1593	WP_230017462.1	nitrogen regulation protein NR(II)	Regulator
KP808_RS03640 (KP808_03610)	-	840948..841187 (-)	240	WP_002551997.1	PP0621 family protein	-
KP808_RS03645 (KP808_03615)	-	841317..842339 (-)	1023	WP_005733851.1	outer membrane protein assembly factor BamD	-
KP808_RS03650 (KP808_03620)	rluD	842489..843451 (+)	963	WP_230017463.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
KP808_RS03655 (KP808_03625)	pgeF	843448..844176 (+)	729	WP_230017464.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49844.95 Da
• Isoelectric Point: 6.5779

>NTDB_id=576955 KP808_RS03630 WP_230017461.1 838026..839363(-) (pilR) [Pseudomonas savastanoi strain MHT1]
MSQRQKILIVDDEPDIRELLEITLGRMKLDTRCARNVAEAHDWLAREPFDMCLTDMRLPDGNGLELVQHIQHGYPHLPVA
MITAHGNLDTAINALKAGAFDFVTKPVDLGRLRELVNSALSLPCAQPARSIDSRLLGDSLAMRTLRNQIGKLARSQAPIY
ISGESGSGKELVARLIHEQGPRIDKPFIPVNCGAIPSELMESEFFGHRKGSFSGAHEDKPGLFQAAHTGTLFLDEVADLP
LAMQVKLLRAIQEKSIRSVGSQQEQIVDVRILCATHKNLNAEVAAGRFRQDLYYRLNVIEVRVPSLRERREDIDQLAASV
LRRLAGNGTQPVARLNAQALETLKSYRFPGNVRELENMLERAYTLCENDEIHASDLRLAESASPQEPNSPSLADIDNLED
YLESIERKLILQALEETRWNRTAAAERLSLSFRSLRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=576955 KP808_RS03630 WP_230017461.1 838026..839363(-) (pilR) [Pseudomonas savastanoi strain MHT1]
ATGAGCCAACGGCAAAAAATCCTGATAGTCGATGACGAGCCGGATATCCGCGAACTGCTGGAGATCACTCTGGGGCGCAT
GAAACTCGATACCCGATGCGCCCGCAATGTTGCCGAGGCCCACGACTGGCTGGCCCGCGAGCCGTTCGACATGTGCCTGA
CCGACATGCGTCTGCCCGACGGCAATGGCCTTGAGCTGGTCCAGCATATCCAGCACGGCTACCCCCATTTGCCGGTGGCG
ATGATCACTGCCCACGGCAACCTGGACACCGCGATTAACGCGCTCAAGGCCGGGGCTTTCGATTTTGTGACCAAGCCGGT
TGACCTCGGCAGGCTGCGCGAACTGGTCAATAGTGCGCTGAGCCTGCCTTGCGCCCAGCCAGCACGCAGCATCGACAGCC
GCCTGCTGGGCGACTCGCTAGCGATGCGTACCTTGCGCAACCAGATCGGCAAGCTGGCCCGCAGCCAGGCGCCGATCTAC
ATCAGCGGCGAATCGGGCAGTGGCAAGGAGCTTGTAGCGCGGCTGATCCACGAGCAGGGCCCGCGCATCGACAAACCGTT
CATACCGGTGAATTGCGGGGCCATTCCTTCCGAGCTGATGGAAAGCGAATTCTTTGGCCATCGCAAAGGCAGTTTCAGCG
GCGCCCACGAAGACAAGCCTGGTCTGTTTCAGGCGGCACATACCGGGACGCTGTTTCTCGACGAGGTGGCCGACCTGCCG
CTGGCCATGCAGGTAAAACTGTTGCGAGCCATCCAGGAAAAGTCCATCCGCAGTGTAGGCAGCCAGCAAGAACAGATCGT
GGACGTACGCATTCTGTGCGCAACGCACAAGAACCTGAACGCAGAGGTTGCGGCAGGTCGTTTCCGTCAGGATCTGTATT
ACCGGTTGAACGTGATCGAAGTGCGCGTACCCTCATTGCGCGAGCGGCGCGAGGACATCGATCAACTGGCAGCCAGTGTT
CTCCGAAGACTTGCCGGCAATGGCACGCAACCGGTGGCGCGCCTGAATGCGCAGGCGCTGGAGACGCTGAAGAGCTACCG
ATTTCCCGGTAACGTGCGCGAACTGGAAAACATGCTGGAGCGCGCCTACACGCTCTGTGAAAACGATGAAATCCACGCCA
GCGATCTGCGCCTGGCAGAGTCCGCCAGCCCCCAGGAACCCAACAGCCCTAGCCTGGCCGACATCGACAACCTTGAAGAT
TACCTGGAAAGCATCGAGCGCAAGCTGATTCTGCAGGCCCTGGAAGAAACCCGCTGGAACCGTACCGCAGCGGCAGAAAG
GCTCAGCTTGTCCTTCAGATCGCTGCGTTATCGGCTGAAGAAACTGGGGCTGGATTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-116)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	77.703	99.775	0.775
pilR	Acinetobacter baumannii strain A118	48.596	100	0.506
luxO	Vibrio cholerae strain A1552	37.162	99.775	0.371