Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   KMZ14_RS01495 Genome accession   NZ_CP076603
Coordinates   312164..312691 (+) Length   175 a.a.
NCBI ID   WP_004810006.1    Uniprot ID   A0A1P8PN98
Organism   Acinetobacter schindleri strain MCDA01     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 307164..317691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KMZ14_RS01480 (KMZ14_01480) pilM 309752..310810 (+) 1059 WP_004810013.1 pilus assembly protein PilM Machinery gene
  KMZ14_RS01485 (KMZ14_01485) comN 310810..311451 (+) 642 WP_273798393.1 PilN domain-containing protein Machinery gene
  KMZ14_RS01490 (KMZ14_01490) comO 311445..312164 (+) 720 WP_026056744.1 type 4a pilus biogenesis protein PilO Machinery gene
  KMZ14_RS01495 (KMZ14_01495) pilP 312164..312691 (+) 528 WP_004810006.1 pilus assembly protein PilP Machinery gene
  KMZ14_RS01500 (KMZ14_01500) pilQ 312708..314807 (+) 2100 WP_273798394.1 type IV pilus secretin PilQ family protein Machinery gene
  KMZ14_RS01505 (KMZ14_01505) aroK 314844..315380 (+) 537 WP_004896271.1 shikimate kinase AroK -
  KMZ14_RS01510 (KMZ14_01510) aroB 315408..316487 (+) 1080 WP_273798395.1 3-dehydroquinate synthase -
  KMZ14_RS01515 (KMZ14_01515) - 316501..317343 (+) 843 WP_262467395.1 hypothetical protein -

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19156.31 Da        Isoelectric Point: 7.2763

>NTDB_id=576583 KMZ14_RS01495 WP_004810006.1 312164..312691(+) (pilP) [Acinetobacter schindleri strain MCDA01]
MKMIKIASALTAGLILAGCESRIDVVNQEMANIRNQPALPIEPAPDFAPVETFSYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNLSRQLQPLESYPLETLTMKGSLKNQAGQIMALINTPDGEIERVQRGSYMGLNHGRVIHITPTQIDLIEIIPDGRDG
YVERPRSMVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=576583 KMZ14_RS01495 WP_004810006.1 312164..312691(+) (pilP) [Acinetobacter schindleri strain MCDA01]
ATGAAGATGATCAAGATTGCTTCAGCACTTACTGCCGGATTGATCCTGGCAGGTTGTGAATCACGTATTGATGTGGTGAA
TCAGGAAATGGCCAATATCCGTAATCAACCGGCATTGCCCATTGAGCCAGCCCCAGATTTTGCTCCGGTTGAAACTTTTA
GTTATGCAGCACATCAGCTGAAAAGTCCTTTCTTGCCAAGTTCATTGGCAGCAGAACTGAAGATTATGGCAGGGAAACGG
GTTTATCCAAACCTATCACGTCAATTGCAACCCTTAGAAAGTTATCCGCTTGAAACTTTGACCATGAAAGGAAGTCTCAA
AAATCAGGCTGGACAGATTATGGCTTTAATTAATACGCCAGATGGGGAAATTGAACGTGTACAGCGCGGTAGTTATATGG
GACTTAATCATGGTCGGGTGATCCATATCACACCGACACAAATTGATTTGATCGAGATTATTCCAGATGGACGCGATGGC
TATGTGGAACGCCCTCGCAGTATGGTCCTGATTGGGCCTGCGCCATAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(28-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1P8PN98

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

73.143

100

0.731
  comL Acinetobacter baylyi ADP1

71.598

96.571

0.691