Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | KPA27_RS00750 | Genome accession | NZ_CP076517 |
| Coordinates | 121510..122463 (+) | Length | 317 a.a. |
| NCBI ID | WP_044776365.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain 39565 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 116510..127463
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KPA27_RS00710 (KPA27_00710) | - | 116773..117723 (-) | 951 | WP_014637311.1 | S66 peptidase family protein | - |
| KPA27_RS00715 (KPA27_00715) | comYA | 117809..118759 (+) | 951 | WP_105140681.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| KPA27_RS00720 (KPA27_00720) | comYB | 118671..119708 (+) | 1038 | WP_238492613.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| KPA27_RS00725 (KPA27_00725) | comYC | 119710..119991 (+) | 282 | WP_024395447.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| KPA27_RS00730 (KPA27_00730) | comGD | 119972..120379 (+) | 408 | WP_024395446.1 | competence type IV pilus minor pilin ComGD | - |
| KPA27_RS00735 (KPA27_00735) | comYE | 120351..120644 (+) | 294 | WP_002936548.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| KPA27_RS00740 (KPA27_00740) | comGF/cglF | 120631..121065 (+) | 435 | WP_024395445.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| KPA27_RS00745 (KPA27_00745) | comGG | 121043..121453 (+) | 411 | WP_024395444.1 | competence type IV pilus minor pilin ComGG | - |
| KPA27_RS00750 (KPA27_00750) | comYH | 121510..122463 (+) | 954 | WP_044776365.1 | class I SAM-dependent methyltransferase | Machinery gene |
| KPA27_RS00755 (KPA27_00755) | - | 122513..123700 (+) | 1188 | WP_014637319.1 | acetate kinase | - |
| KPA27_RS00760 (KPA27_00760) | - | 123961..124512 (+) | 552 | WP_014637320.1 | folate family ECF transporter S component | - |
| KPA27_RS00765 (KPA27_00765) | - | 124568..125824 (+) | 1257 | WP_024401511.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| KPA27_RS00770 (KPA27_00770) | pepA | 125869..126930 (-) | 1062 | WP_024409100.1 | glutamyl aminopeptidase | - |
| KPA27_RS00775 (KPA27_00775) | - | 127077..127361 (+) | 285 | WP_044769538.1 | DUF4651 domain-containing protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35688.73 Da Isoelectric Point: 4.4003
>NTDB_id=576102 KPA27_RS00750 WP_044776365.1 121510..122463(+) (comYH) [Streptococcus suis strain 39565]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVAGQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVAGQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=576102 KPA27_RS00750 WP_044776365.1 121510..122463(+) (comYH) [Streptococcus suis strain 39565]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGGTCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGCTTTATCCTATCTTTCCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTTA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGTTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGGTCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGCTTTATCCTATCTTTCCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTTA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGTTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.443 |
99.685 |
0.603 |
| comYH | Streptococcus mutans UA159 |
60.127 |
99.685 |
0.599 |