Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   ZHX2020_RS01680 Genome accession   NZ_CP076409
Coordinates   286122..286418 (-) Length   98 a.a.
NCBI ID   WP_003230162.1    Uniprot ID   A0A809FGR8
Organism   Bacillus sp. ZHX3     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 281122..291418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ZHX2020_RS01635 (ZHX2020_01635) tasA 281530..282315 (-) 786 WP_014480250.1 biofilm matrix protein TasA -
  ZHX2020_RS01640 (ZHX2020_01640) - 282379..282951 (-) 573 WP_003230181.1 signal peptidase I SipW -
  ZHX2020_RS01645 (ZHX2020_01645) tapA 282935..283696 (-) 762 WP_014480251.1 amyloid fiber anchoring/assembly protein TapA -
  ZHX2020_RS01650 (ZHX2020_01650) - 283968..284294 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  ZHX2020_RS01655 (ZHX2020_01655) - 284336..284515 (-) 180 WP_014480252.1 YqzE family protein -
  ZHX2020_RS01660 (ZHX2020_01660) comGG 284586..284960 (-) 375 WP_014480253.1 ComG operon protein ComGG Machinery gene
  ZHX2020_RS01665 (ZHX2020_01665) comGF 284961..285344 (-) 384 WP_014480254.1 ComG operon protein ComGF Machinery gene
  ZHX2020_RS01670 (ZHX2020_01670) comGE 285370..285717 (-) 348 WP_014480255.1 ComG operon protein 5 Machinery gene
  ZHX2020_RS01675 (ZHX2020_01675) comGD 285701..286132 (-) 432 WP_014480256.1 comG operon protein ComGD Machinery gene
  ZHX2020_RS01680 (ZHX2020_01680) comGC 286122..286418 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  ZHX2020_RS01685 (ZHX2020_01685) comGB 286432..287469 (-) 1038 WP_031600685.1 comG operon protein ComGB Machinery gene
  ZHX2020_RS01690 (ZHX2020_01690) comGA 287456..288526 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  ZHX2020_RS01695 (ZHX2020_01695) - 288738..288935 (-) 198 WP_014480259.1 CBS domain-containing protein -
  ZHX2020_RS01700 (ZHX2020_01700) corA 288937..289890 (-) 954 WP_014480260.1 magnesium transporter CorA -
  ZHX2020_RS01705 (ZHX2020_01705) - 290032..291360 (+) 1329 WP_014480261.1 hemolysin family protein -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10849.74 Da        Isoelectric Point: 6.7083

>NTDB_id=575105 ZHX2020_RS01680 WP_003230162.1 286122..286418(-) (comGC) [Bacillus sp. ZHX3]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH

Nucleotide


Download         Length: 297 bp        

>NTDB_id=575105 ZHX2020_RS01680 WP_003230162.1 286122..286418(-) (comGC) [Bacillus sp. ZHX3]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A809FGR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

100

100

1
  comGC Staphylococcus aureus MW2

41.304

93.878

0.388
  comGC Staphylococcus aureus N315

41.304

93.878

0.388
  comYC Streptococcus suis isolate S10

49.333

76.531

0.378