Detailed information NTG0574824

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: KN217_RS17360
• Genome accession: NZ_CP076348
• Coordinates: 3578184..3579524 (+)
• Length: 446 a.a.
• NCBI ID: WP_301619161.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain DN36
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3573184..3584524

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KN217_RS17335 (KN217_17265)	pgeF	3573321..3574058 (-)	738	WP_301619160.1	peptidoglycan editing factor PgeF	-
KN217_RS17340 (KN217_17270)	rluD	3574055..3575029 (-)	975	WP_237262566.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
KN217_RS17345 (KN217_17275)	-	3575177..3576166 (+)	990	WP_155550693.1	outer membrane protein assembly factor BamD	-
KN217_RS17350 (KN217_17280)	-	3576253..3576480 (+)	228	WP_155550694.1	PP0621 family protein	-
KN217_RS17355 (KN217_17285)	pilS	3576470..3578062 (+)	1593	WP_008569736.1	PAS domain-containing sensor histidine kinase	Regulator
KN217_RS17360 (KN217_17290)	pilR	3578184..3579524 (+)	1341	WP_301619161.1	sigma-54 dependent transcriptional regulator	Regulator
KN217_RS17365 (KN217_17295)	-	3579582..3580640 (-)	1059	WP_008569734.1	DUF2333 family protein	-
KN217_RS17370 (KN217_17300)	-	3580859..3582454 (+)	1596	WP_155550696.1	PleD family two-component system response regulator	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49681.18 Da
• Isoelectric Point: 6.3299

>NTDB_id=574824 KN217_RS17360 WP_301619161.1 3578184..3579524(+) (pilR) [Stutzerimonas stutzeri strain DN36]
MSARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEAREWLAREHYDLCLTDMRLPDGSGLELVQLIQQQHPQLPVA
MITAYGSLDTAISALKAGAFDFLTKPVDLNRLRELVSTALRVRSVTTEAAPVDSRLLGSSPPMKVLRKQIDKLARSQAPV
YISGESGSGKELVARLIHEQGPRSERPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQVANGGTLFLDEVADL
PLPMQVKLLRAIQEKAVRAVGGTQEVLVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIALLADA
MLRRLAQECGDSPAHLHPDALAKLLAYRFPGNVRELENMLERAYTLCDGDEIKAADLRLADSPGAGESGEVNLAQIDSLE
DHLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1341 bp

>NTDB_id=574824 KN217_RS17360 WP_301619161.1 3578184..3579524(+) (pilR) [Stutzerimonas stutzeri strain DN36]
ATGAGCGCCCGCCAGAAAGCACTGATCATCGATGACGAGCCCGACATTCGCGAACTCCTGGAAATCACCCTGGGGCGCAT
GAAGCTCGACACCCGCAGCGCCCGCAACCTCAAAGAGGCCCGCGAGTGGCTGGCACGCGAGCACTATGACCTGTGCCTGA
CCGACATGCGCCTGCCCGACGGCAGCGGACTGGAGTTGGTGCAGCTCATCCAGCAACAGCATCCGCAACTGCCGGTGGCG
ATGATCACCGCCTACGGCAGCCTGGACACCGCGATCAGCGCACTCAAGGCCGGCGCCTTCGACTTCCTCACCAAGCCGGT
CGACCTCAACCGTCTGCGCGAGCTGGTCAGCACCGCACTGCGCGTACGCAGCGTCACCACCGAAGCGGCACCGGTGGACA
GCCGCCTGCTCGGCAGCTCGCCGCCGATGAAGGTGCTGCGCAAGCAGATCGACAAGCTCGCCCGCAGCCAGGCGCCGGTC
TACATCAGCGGCGAATCCGGCAGCGGCAAGGAGCTGGTGGCGCGGCTGATTCACGAACAGGGGCCGCGCAGCGAGCGGCC
GTTCGTACCGGTCAACTGCGGAGCGATTCCGTCGGAGCTGATGGAGAGCGAATTCTTCGGCCACAAGAAAGGCAGCTTCA
GCGGCGCCATCGAAGACAAGCCCGGGCTGTTCCAGGTAGCCAATGGCGGCACCCTGTTCCTCGACGAAGTAGCCGACCTG
CCGCTGCCGATGCAGGTCAAGCTCCTGCGCGCCATCCAGGAAAAGGCCGTGCGCGCGGTTGGTGGCACTCAGGAAGTGCT
GGTCGATGTGCGCATCCTCTGCGCCACCCACAAGGATCTCGCCAGCGAAGTCGCCGCCGGGCGCTTCCGCCAGGACCTGT
ATTACCGCCTCAACGTCATCGAACTGCGCGTGCCGCCGTTGCGCGAGCGTCGCGAAGACATCGCCCTGCTGGCCGATGCG
ATGCTGCGCCGCCTGGCGCAGGAATGCGGCGACAGCCCGGCGCACCTGCATCCCGACGCCCTGGCGAAACTGCTGGCCTA
CCGCTTTCCGGGCAACGTGCGCGAACTGGAGAACATGCTCGAACGCGCCTACACCCTGTGCGACGGCGACGAGATCAAGG
CCGCGGACCTGCGCCTGGCCGACAGCCCGGGGGCGGGAGAAAGCGGAGAAGTCAACCTGGCGCAGATCGACAGCCTGGAA
GACCACCTGGAGGAGATCGAGCGCAAGCTGATCATGCAGGCCCTCGAGGAAACCCGCTGGAACCGCACCGCCGCGGCACA
GCGCCTGGGCCTGACCTTCCGCTCGATGCGTTATCGACTGAAGAAGCTCGGCCTGGATTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (403-443)

• Sigma-54 interaction domain (Sigma54_activat) (137-302)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	83.559	99.552	0.832
pilR	Acinetobacter baumannii strain A118	50.545	100	0.52
luxO	Vibrio cholerae strain A1552	37.136	100	0.372