Detailed information NTG0568368

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: MK848_RS06265
• Genome accession: NZ_CP092824
• Coordinates: 1219832..1220437 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain S1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1214832..1225437

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MK848_RS06235 (MK848_06240)	-	1215645..1216034 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
MK848_RS06240 (MK848_06245)	yajC	1216091..1216357 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
MK848_RS06245 (MK848_06250)	tgt	1216394..1217539 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
MK848_RS06250 (MK848_06255)	queA	1217566..1218594 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
MK848_RS06255 (MK848_06260)	yrzS	1218624..1218824 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
MK848_RS06260 (MK848_06265)	ruvB	1218817..1219821 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
MK848_RS06265 (MK848_06270)	ruvA	1219832..1220437 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
MK848_RS06270 (MK848_06275)	bofC	1220575..1221087 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
MK848_RS06275 (MK848_06280)	csbX	1221135..1222442 (-)	1308	WP_003246197.1	MFS transporter	-
MK848_RS06280 (MK848_06285)	iolG	1222513..1223538 (-)	1026	WP_029318179.1	inositol 2-dehydrogenase	-
MK848_RS06285 (MK848_06290)	yrzF	1223776..1224423 (+)	648	WP_003246159.1	phosphotransferase	-
MK848_RS06290 (MK848_06295)	-	1224469..1224591 (-)	123	WP_003229707.1	hypothetical protein	-
MK848_RS06295 (MK848_06305)	-	1224754..1225122 (+)	369	WP_224912982.1	DUF5412 family protein	-
MK848_RS06300 (MK848_06310)	-	1225129..1225269 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=568368 MK848_RS06265 WP_003229717.1 1219832..1220437(-) (ruvA) [Bacillus subtilis strain S1]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=568368 MK848_RS06265 WP_003229717.1 1219832..1220437(-) (ruvA) [Bacillus subtilis strain S1]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCAGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408