Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   KIP81_RS05740 Genome accession   NZ_CP075172
Coordinates   1146632..1148446 (-) Length   604 a.a.
NCBI ID   WP_243602555.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   regulate competence (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 1141516..1164106 1146632..1148446 within 0


Gene organization within MGE regions


Location: 1141516..1164106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS05720 (KIP81_05720) - 1141516..1142364 (+) 849 WP_243602551.1 AraC family transcriptional regulator -
  KIP81_RS05725 (KIP81_05725) - 1142419..1142889 (-) 471 WP_243602552.1 pyridoxamine 5'-phosphate oxidase family protein -
  KIP81_RS05730 (KIP81_05730) - 1142892..1144763 (-) 1872 WP_243602553.1 hypothetical protein -
  KIP81_RS05735 (KIP81_05735) rcrQ 1144870..1146642 (-) 1773 WP_243602554.1 ABC transporter ATP-binding protein Regulator
  KIP81_RS05740 (KIP81_05740) rcrP 1146632..1148446 (-) 1815 WP_243602555.1 ABC transporter ATP-binding protein Regulator
  KIP81_RS05745 (KIP81_05745) rcrR 1148450..1148890 (-) 441 WP_243602556.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  KIP81_RS05750 (KIP81_05750) - 1149038..1149448 (-) 411 WP_243602557.1 peptide deformylase -
  KIP81_RS05755 (KIP81_05755) - 1149451..1149954 (-) 504 WP_243602558.1 GNAT family N-acetyltransferase -
  KIP81_RS05760 (KIP81_05760) gdhA 1150107..1151456 (-) 1350 WP_021142476.1 NADP-specific glutamate dehydrogenase -
  KIP81_RS05765 (KIP81_05765) - 1151686..1152183 (+) 498 WP_074629507.1 DUF308 domain-containing protein -
  KIP81_RS05770 (KIP81_05770) queF 1152222..1152713 (-) 492 WP_021142478.1 preQ(1) synthase -
  KIP81_RS05775 (KIP81_05775) queE 1152729..1153442 (-) 714 WP_039690525.1 7-carboxy-7-deazaguanine synthase QueE -
  KIP81_RS05780 (KIP81_05780) queD 1153435..1153881 (-) 447 WP_027968631.1 6-carboxytetrahydropterin synthase QueD -
  KIP81_RS05785 (KIP81_05785) queC 1153881..1154534 (-) 654 WP_004232125.1 7-cyano-7-deazaguanine synthase QueC -
  KIP81_RS05790 (KIP81_05790) - 1154699..1156468 (-) 1770 WP_024343958.1 ABC transporter ATP-binding protein -
  KIP81_RS05795 (KIP81_05795) - 1156471..1158210 (-) 1740 WP_074479620.1 ABC transporter ATP-binding protein -
  KIP81_RS05800 (KIP81_05800) - 1158255..1160123 (-) 1869 WP_243602559.1 ABC-F family ATP-binding cassette domain-containing protein -
  KIP81_RS05805 (KIP81_05805) - 1160120..1161325 (-) 1206 WP_074629503.1 CCA tRNA nucleotidyltransferase -
  KIP81_RS05810 (KIP81_05810) dapB 1161322..1162089 (-) 768 WP_004232139.1 4-hydroxy-tetrahydrodipicolinate reductase -
  KIP81_RS05815 (KIP81_05815) - 1162109..1162957 (-) 849 WP_021142488.1 DegV family protein -
  KIP81_RS05820 (KIP81_05820) - 1162957..1163337 (-) 381 WP_021142489.1 DUF1149 family protein -
  KIP81_RS05825 (KIP81_05825) - 1163453..1164106 (-) 654 WP_243602560.1 glucosaminidase domain-containing protein -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67005.83 Da        Isoelectric Point: 6.5266

>NTDB_id=568253 KIP81_RS05740 WP_243602555.1 1146632..1148446(-) (rcrP) [Streptococcus equinus strain SheepZ001]
MLKIFKRLTAKEVAMIIIAVLFVCLNVFLDLKIPDYMSDITSLLSTQGTKAKDIFAWNFDAPGMRMVLLSLGSFAASVVV
GFLAARIAASFSTRLRDDIFHSVLDYSDAEIKKFSIPSLLTRTTNDITQIQLVFTMGLQVVTKGPIMAIWAITKIADKNH
EWLMVLVVAVAVMIFMLAFLLMMVMPKQRMIQKLTDKLNSITRESLSGIRVVRAYNAESYQDGKFEKANNDVTNLNLFIG
RSMSLMSPVMTSISSGMTLAIYWIGAFLIEEIAIPKDPTKIAGAMQDKVNIFSDMVVYSSYAMQVVIGFMMMIAVFFILP
RAVVAAGRINEVLDTKSSVLYPEESKAEPKEKGTVEFDNVSFRYSKNSEAVLEHVSFKAKAGDTVAFIGSTGSGKSTLVN
LIPRFYDATEGTIKVDGVNVRDYDHDTLHKIVGYIPQKAVLFSGDITSNMNMGDSNSSPLDDDKIWEALDLAQGRDFVES
KEGQLKAPVSQGGQNFSGGQKQRLAIARALARKPEIIIFDDSFSALDYKTDRILRSQLKERTANMTKLIVAQRISTIMDA
DQILVLDEGKVVGQGTHEELLANNEVYREIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=568253 KIP81_RS05740 WP_243602555.1 1146632..1148446(-) (rcrP) [Streptococcus equinus strain SheepZ001]
ATGTTAAAAATTTTTAAACGATTAACGGCAAAAGAAGTCGCTATGATAATTATTGCCGTACTATTTGTGTGTTTGAATGT
TTTCTTGGATTTGAAAATCCCTGATTACATGTCAGATATCACATCCTTGCTATCAACTCAAGGAACAAAAGCGAAAGATA
TATTTGCTTGGAATTTTGATGCCCCTGGAATGCGTATGGTCTTGCTTTCTTTAGGAAGTTTTGCAGCATCTGTGGTTGTC
GGTTTCTTAGCGGCACGTATCGCAGCAAGTTTCAGTACTCGTCTGCGTGATGATATTTTCCATAGTGTTTTAGACTATTC
GGATGCCGAAATCAAGAAGTTTTCAATTCCAAGTCTTTTGACACGTACAACGAATGATATTACTCAAATTCAATTAGTCT
TCACAATGGGACTTCAAGTTGTTACTAAAGGTCCGATTATGGCGATCTGGGCAATTACTAAGATTGCTGATAAAAACCAT
GAATGGTTAATGGTACTTGTTGTGGCGGTTGCAGTCATGATTTTCATGCTTGCTTTCCTTCTTATGATGGTAATGCCAAA
ACAACGTATGATTCAAAAACTTACTGATAAACTAAACAGTATTACACGTGAATCATTAAGTGGTATTCGTGTTGTTCGAG
CTTACAACGCTGAAAGTTACCAAGATGGTAAATTTGAAAAGGCAAATAACGATGTCACAAATCTTAATCTTTTCATTGGA
CGCTCAATGTCATTGATGTCACCGGTGATGACAAGTATTTCAAGTGGTATGACATTGGCGATTTACTGGATTGGTGCCTT
CTTGATTGAAGAAATTGCTATTCCAAAAGATCCGACAAAAATTGCAGGCGCTATGCAAGACAAGGTGAACATTTTCTCTG
ATATGGTAGTTTATTCATCATATGCCATGCAAGTTGTTATCGGATTTATGATGATGATTGCTGTGTTCTTCATCTTGCCG
CGTGCGGTTGTAGCGGCAGGTCGTATCAATGAAGTTTTGGATACAAAATCATCTGTACTTTATCCTGAAGAAAGTAAAGC
TGAACCAAAAGAAAAAGGAACTGTAGAGTTTGATAATGTTTCATTCCGATACAGTAAAAATTCTGAGGCTGTCTTAGAAC
ATGTTTCTTTCAAAGCAAAAGCTGGTGATACTGTTGCCTTTATTGGGTCAACTGGTTCAGGTAAATCAACCTTAGTGAAC
TTGATTCCACGTTTCTACGATGCGACGGAAGGAACAATCAAGGTTGATGGTGTCAATGTTCGTGATTACGACCATGATAC
GCTTCATAAGATTGTCGGATACATTCCACAAAAAGCAGTTCTCTTTAGCGGAGACATCACTTCTAATATGAATATGGGTG
ACAGCAATAGCTCACCACTTGATGACGATAAAATCTGGGAAGCTCTTGACTTGGCTCAAGGTAGAGACTTTGTTGAAAGC
AAAGAAGGTCAGCTAAAAGCACCAGTTTCTCAAGGCGGTCAAAACTTCTCAGGTGGTCAAAAGCAACGTTTGGCAATTGC
GCGTGCTCTTGCACGTAAACCAGAAATCATTATCTTTGATGATTCATTCTCTGCACTTGATTACAAGACTGACCGAATTC
TTCGTTCACAATTGAAAGAACGCACAGCCAACATGACAAAATTGATTGTTGCTCAACGTATTTCGACAATCATGGACGCT
GACCAAATCTTGGTTCTTGACGAAGGTAAAGTTGTTGGTCAAGGTACTCACGAAGAACTTCTTGCAAACAACGAAGTTTA
CCGTGAAATTGCCTACTCACAATTATCTAAGGAGGAATTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(372-522)

ABC transporter transmembrane region (ABC_membrane)

(16-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

67.934

100

0.68