Detailed information NTG0568251

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: KIP81_RS05490
• Genome accession: NZ_CP075172
• Coordinates: 1100574..1101803 (-)
• Length: 409 a.a.
• NCBI ID: WP_024343987.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain SheepZ001
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1095574..1106803

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIP81_RS05470 (KIP81_05470)	-	1096798..1097466 (+)	669	WP_074533814.1	YoaK family protein	-
KIP81_RS05475 (KIP81_05475)	mmuM	1097501..1098445 (-)	945	WP_243602522.1	homocysteine S-methyltransferase	-
KIP81_RS05480 (KIP81_05480)	-	1098458..1099834 (-)	1377	WP_243602523.1	amino acid permease	-
KIP81_RS05485 (KIP81_05485)	yihA	1099971..1100564 (-)	594	WP_004232043.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
KIP81_RS05490 (KIP81_05490)	clpX	1100574..1101803 (-)	1230	WP_024343987.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
KIP81_RS05495 (KIP81_05495)	-	1101840..1102010 (-)	171	WP_021142431.1	hypothetical protein	-
KIP81_RS05500 (KIP81_05500)	-	1102026..1102520 (-)	495	WP_004232047.1	dihydrofolate reductase	-
KIP81_RS05505 (KIP81_05505)	-	1102604..1103443 (-)	840	WP_021142433.1	thymidylate synthase	-
KIP81_RS05510 (KIP81_05510)	-	1103776..1104954 (+)	1179	WP_243602524.1	hydroxymethylglutaryl-CoA synthase	-
KIP81_RS05515 (KIP81_05515)	-	1104941..1106215 (+)	1275	WP_243602525.1	hydroxymethylglutaryl-CoA reductase, degradative	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45200.64 Da
• Isoelectric Point: 4.4317

>NTDB_id=568251 KIP81_RS05490 WP_024343987.1 1100574..1101803(-) (clpX) [Streptococcus equinus strain SheepZ001]
MVGNRTNDVKVYCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLAEVPKPKELLATLDEYVVGQER
AKRALAVAVYNHYKRVSFAESRDEEDVELQKSNILLIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADFNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEDIVKQRLGEKIIGFGQNNRKIDEDASYMQEIISEDIQKFGLIPEFIGRLPVVAALEQLTADDLVRI
LTEPRNALVKQYQTLLSYDGVELEFDEDALQAIANKAIERKTGARGLRSIIEETMMDIMFEIPSREEVTKVRITKDAVEG
TDKPILETA

Nucleotide

• Length: 1230 bp

>NTDB_id=568251 KIP81_RS05490 WP_024343987.1 1100574..1101803(-) (clpX) [Streptococcus equinus strain SheepZ001]
ATGGTTGGAAATCGAACAAATGATGTAAAAGTTTATTGCTCATTTTGTGGAAAAAGCCAAGACGAAGTAAAAAAAATTAT
TGCAGGAAATAATGTTTTTATTTGTAATGAATGTGTGGCTTTATCCCAAGAGATTATTAAAGAAGAATTAGCAGAAGAAG
TTCTTGCAGATTTGGCAGAAGTTCCAAAACCAAAAGAATTACTAGCTACCCTTGATGAATATGTTGTTGGTCAAGAACGT
GCAAAACGTGCTCTTGCAGTAGCAGTTTACAATCACTACAAGCGTGTATCTTTTGCTGAAAGTCGTGATGAAGAAGATGT
TGAATTGCAAAAATCAAACATCTTGCTTATCGGACCAACAGGGTCAGGGAAAACTTTCCTTGCTCAAACATTGGCTAAAA
GTCTTAATGTTCCATTTGCGATTGCAGATGCGACATCATTGACTGAAGCAGGATATGTCGGTGAAGATGTTGAAAATATC
CTTTTGAAACTGATTCAAGCAGCTGATTTTAATATTGAACGTGCTGAACGTGGTATTATCTACGTCGATGAAATTGATAA
AATCGCCAAAAAAGGTGAAAATGTTTCAATTACTCGTGACGTTTCAGGTGAAGGTGTTCAACAAGCTCTTCTTAAAATCA
TTGAAGGAACTGTTGCTAGCGTACCACCACAAGGTGGACGTAAACACCCTAACCAAGAAATGATTCAAATTGATACCAAG
AACATTCTTTTCATCGTTGGTGGTGCGTTTGATGGTATCGAAGATATTGTTAAACAACGTCTTGGTGAAAAAATTATTGG
TTTTGGTCAAAATAACCGTAAAATCGATGAAGATGCATCTTATATGCAAGAAATCATCTCAGAAGATATTCAAAAATTTG
GTCTTATTCCAGAGTTTATCGGACGCTTGCCTGTAGTAGCTGCGCTTGAACAATTGACTGCGGATGATTTGGTTCGTATC
TTGACTGAACCTCGCAATGCCTTGGTTAAACAATACCAAACATTGCTATCTTATGATGGTGTTGAGTTGGAATTTGATGA
AGATGCTCTTCAAGCAATTGCTAATAAAGCTATCGAACGTAAGACAGGTGCGCGTGGACTTCGTTCAATTATCGAAGAAA
CAATGATGGATATCATGTTTGAAATTCCTAGTCGCGAAGAAGTTACCAAAGTTCGCATCACTAAAGATGCTGTCGAAGGT
ACTGATAAACCTATCTTAGAAACTGCATAA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	90.22	100	0.902
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.853	98.044	0.577