Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   KIP81_RS07245 Genome accession   NZ_CP075172
Coordinates   1457033..1457842 (-) Length   269 a.a.
NCBI ID   WP_243602702.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1452033..1462842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS07235 (KIP81_07230) smc 1452454..1455993 (-) 3540 WP_243602701.1 chromosome segregation protein SMC -
  KIP81_RS07240 (KIP81_07235) rnc 1456140..1456826 (-) 687 WP_021142842.1 ribonuclease III -
  KIP81_RS07245 (KIP81_07240) vicX 1457033..1457842 (-) 810 WP_243602702.1 MBL fold metallo-hydrolase Regulator
  KIP81_RS07250 (KIP81_07245) vicK 1457843..1459195 (-) 1353 WP_024343735.1 cell wall metabolism sensor histidine kinase VicK Regulator
  KIP81_RS07255 (KIP81_07250) vicR 1459188..1459898 (-) 711 WP_021142846.1 response regulator YycF Regulator
  KIP81_RS07260 (KIP81_07255) - 1460206..1460970 (+) 765 WP_024343734.1 amino acid ABC transporter ATP-binding protein -
  KIP81_RS07265 (KIP81_07260) - 1460981..1461784 (+) 804 WP_243602703.1 transporter substrate-binding domain-containing protein -
  KIP81_RS07270 (KIP81_07265) - 1461800..1462504 (+) 705 WP_004232799.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30215.04 Da        Isoelectric Point: 5.1978

>NTDB_id=568258 KIP81_RS07245 WP_243602702.1 1457033..1457842(-) (vicX) [Streptococcus equinus strain SheepZ001]
MSENAFKYSVLASGSTGNSFYVETPQKRLLIDAGLTGKKITSLLADIDRKPEDLDAILITHEHSDHIKGVGVLARRYNLD
VYANEKTWQMIDERNMIGKVDTAQKHVFERGKVLTFGDIDIESFGVSHDAVDPQFYRLMKDNKSFVVLTDTGYVSDRMAG
VIENADGYLIESNHDVEILRAGSYPWSLKQRILSDRGHLSNEDGADTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLMQADFAVGHDMTVFDTSPDEATPLTEI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=568258 KIP81_RS07245 WP_243602702.1 1457033..1457842(-) (vicX) [Streptococcus equinus strain SheepZ001]
ATGTCTGAGAATGCTTTTAAATATAGTGTCTTAGCTTCCGGTTCTACTGGTAACTCATTTTATGTGGAAACACCACAAAA
ACGTCTTTTGATTGATGCAGGGTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGATATTGATCGAAAACCAGAAGATT
TGGATGCTATTTTAATTACACACGAACATTCCGACCATATTAAGGGTGTTGGAGTGCTTGCTCGTCGTTACAATCTTGAT
GTTTATGCCAATGAAAAAACTTGGCAAATGATTGATGAGCGTAATATGATTGGAAAAGTTGATACCGCTCAGAAACATGT
TTTTGAGCGTGGTAAAGTATTGACTTTCGGTGATATTGATATTGAAAGTTTCGGAGTTAGCCACGATGCGGTTGACCCAC
AATTTTACCGTTTGATGAAAGATAACAAATCATTTGTTGTTTTGACTGATACGGGTTATGTTAGTGATAGAATGGCTGGT
GTCATTGAAAATGCAGATGGCTATTTGATTGAGTCAAATCACGATGTTGAGATTCTGCGTGCAGGTTCTTATCCATGGAG
TTTAAAACAACGTATCTTATCTGATAGAGGGCATTTATCAAATGAAGATGGTGCAGATACGATGATTCGCACCATTGGTA
ATCGTACGAAAAAAATCTATCTTGGTCACTTGAGTAAGGAAAATAATATCAAAGAACTAGCTCACATGACTATGGAAAAT
AATTTGATGCAAGCTGATTTTGCGGTTGGACACGATATGACTGTCTTTGATACGTCACCGGATGAAGCAACGCCATTAAC
TGAAATCTAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762