Detailed information NTG0567447

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: KH277_RS02900
• Genome accession: NZ_CP075054
• Coordinates: 569057..570220 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain VTX20
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 564057..575220

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KH277_RS02880 (KH277_02880)	-	564473..565669 (+)	1197	WP_213390901.1	glycosyltransferase	-
KH277_RS02885 (KH277_02885)	-	565802..566878 (+)	1077	WP_003151382.1	MraY family glycosyltransferase	-
KH277_RS02890 (KH277_02890)	-	566968..568182 (-)	1215	WP_014305930.1	LCP family protein	-
KH277_RS02895 (KH277_02895)	-	568187..568834 (-)	648	WP_003151384.1	YigZ family protein	-
KH277_RS02900 (KH277_02900)	degS	569057..570220 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
KH277_RS02905 (KH277_02905)	degU	570297..570986 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
KH277_RS02910 (KH277_02910)	-	571084..571932 (+)	849	WP_043867471.1	DegV family protein	-
KH277_RS02915 (KH277_02915)	comFA	572040..573425 (+)	1386	WP_043867470.1	DEAD/DEAH box helicase	Machinery gene
KH277_RS02920 (KH277_02920)	-	573483..573767 (+)	285	WP_003151389.1	competence protein ComFB	-
KH277_RS02925 (KH277_02925)	comFC	573773..574462 (+)	690	WP_196769287.1	phosphoribosyltransferase family protein	Machinery gene
KH277_RS02930 (KH277_02930)	-	574536..574955 (+)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=567447 KH277_RS02900 WP_003151385.1 569057..570220(+) (degS) [Bacillus velezensis strain VTX20]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=567447 KH277_RS02900 WP_003151385.1 569057..570220(+) (degS) [Bacillus velezensis strain VTX20]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948