Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | WQG_RS10710 | Genome accession | NC_020515 |
| Coordinates | 2305430..2306545 (+) | Length | 371 a.a. |
| NCBI ID | WP_015433563.1 | Uniprot ID | A0A426FKK4 |
| Organism | Bibersteinia trehalosi USDA-ARS-USMARC-192 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2300430..2311545
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WQG_RS10675 (WQG_21540) | xerD | 2300819..2301712 (+) | 894 | WP_015433555.1 | site-specific tyrosine recombinase XerD | - |
| WQG_RS10680 (WQG_21550) | - | 2301727..2302020 (+) | 294 | WP_025290020.1 | DUF5389 family protein | - |
| WQG_RS10685 (WQG_21560) | - | 2302095..2302640 (+) | 546 | WP_015433558.1 | DsbE family thiol:disulfide interchange protein | - |
| WQG_RS10690 (WQG_21570) | - | 2302642..2303103 (+) | 462 | WP_015433559.1 | cytochrome c-type biogenesis protein | - |
| WQG_RS10695 (WQG_21580) | ccmI | 2303105..2303998 (+) | 894 | WP_015433560.1 | c-type cytochrome biogenesis protein CcmI | - |
| WQG_RS10700 (WQG_21590) | crp | 2304084..2304758 (+) | 675 | WP_025266676.1 | cAMP-activated global transcriptional regulator CRP | - |
| WQG_RS10705 (WQG_21600) | def | 2304797..2305309 (-) | 513 | WP_015433562.1 | peptide deformylase | - |
| WQG_RS10710 (WQG_21610) | dprA | 2305430..2306545 (+) | 1116 | WP_015433563.1 | DNA-processing protein DprA | Machinery gene |
| WQG_RS10715 (WQG_21620) | fumC | 2306658..2308052 (+) | 1395 | WP_015433564.1 | class II fumarate hydratase | - |
| WQG_RS10720 (WQG_21630) | pdxH | 2308102..2308734 (-) | 633 | WP_015433565.1 | pyridoxamine 5'-phosphate oxidase | - |
| WQG_RS10725 (WQG_21640) | selA | 2308795..2310174 (-) | 1380 | WP_015433566.1 | L-seryl-tRNA(Sec) selenium transferase | - |
| WQG_RS10730 (WQG_21650) | gntR | 2310354..2311352 (+) | 999 | WP_015433567.1 | gluconate operon transcriptional repressor GntR | - |
Sequence
Protein
Download Length: 371 a.a. Molecular weight: 41412.59 Da Isoelectric Point: 6.1238
>NTDB_id=56705 WQG_RS10710 WP_015433563.1 2305430..2306545(+) (dprA) [Bibersteinia trehalosi USDA-ARS-USMARC-192]
MLEKLLTLLQIPQLGAQKINRLLTEIDFATFCQFDKTQLRQIGWNEKQIQRWFHPEQRWQEDALRWAEHADCHILTLFDE
NYPFLLKQIATAPPILFVHGNIESLSLPQIAIVGSRNYSHYGEYWAGHFSAELVKHHFAITSGLAIGIDGFCHQRTIDEG
GTTIAVLGSGLNCLYPARHRKLAEKIVETGGALVSEFFPKQPPLAENFPRRNRIISGLSLGTLVVEAALNSGSLITARYA
LEQGREVFAIPNTLQNPYAAGCHKLIKDGAILVDNIQDILEAIAWQYQPQQGELFELETKQALQKPQNFAKNIPELTACQ
AAIFAQITLNPISADDLAKAVELDIASVLVELLNLELLGIIKQTTGGYTRI
MLEKLLTLLQIPQLGAQKINRLLTEIDFATFCQFDKTQLRQIGWNEKQIQRWFHPEQRWQEDALRWAEHADCHILTLFDE
NYPFLLKQIATAPPILFVHGNIESLSLPQIAIVGSRNYSHYGEYWAGHFSAELVKHHFAITSGLAIGIDGFCHQRTIDEG
GTTIAVLGSGLNCLYPARHRKLAEKIVETGGALVSEFFPKQPPLAENFPRRNRIISGLSLGTLVVEAALNSGSLITARYA
LEQGREVFAIPNTLQNPYAAGCHKLIKDGAILVDNIQDILEAIAWQYQPQQGELFELETKQALQKPQNFAKNIPELTACQ
AAIFAQITLNPISADDLAKAVELDIASVLVELLNLELLGIIKQTTGGYTRI
Nucleotide
Download Length: 1116 bp
>NTDB_id=56705 WQG_RS10710 WP_015433563.1 2305430..2306545(+) (dprA) [Bibersteinia trehalosi USDA-ARS-USMARC-192]
ATGCTCGAAAAACTTTTAACGTTATTACAAATCCCCCAGCTTGGCGCGCAAAAAATCAATCGCTTACTCACGGAAATCGA
TTTTGCCACCTTCTGCCAATTTGATAAAACGCAACTGCGCCAAATAGGCTGGAATGAAAAACAAATCCAACGCTGGTTTC
ACCCAGAACAACGTTGGCAGGAAGATGCATTACGCTGGGCAGAACATGCCGATTGCCATATTTTAACGTTATTTGATGAA
AATTATCCTTTCTTACTAAAACAGATTGCAACTGCACCCCCCATCTTATTCGTACACGGTAACATTGAAAGCCTCTCTTT
GCCACAAATTGCCATTGTTGGCAGCCGTAATTACTCACATTACGGCGAATATTGGGCTGGGCATTTTTCTGCGGAATTAG
TCAAACATCATTTTGCAATAACCAGCGGCTTAGCTATTGGGATTGATGGCTTCTGCCATCAACGAACAATTGATGAAGGC
GGCACAACCATCGCGGTATTAGGTTCTGGTTTAAATTGCCTATACCCTGCACGTCATCGTAAGCTTGCTGAAAAAATTGT
TGAAACAGGCGGAGCGCTAGTTTCAGAGTTTTTTCCAAAACAGCCGCCACTTGCTGAAAACTTTCCGCGCCGCAACCGTA
TTATCAGTGGCTTATCGCTCGGTACATTAGTAGTAGAAGCAGCTTTAAATAGTGGCTCACTTATCACTGCACGCTATGCA
CTCGAACAAGGGCGAGAGGTCTTCGCCATTCCCAATACCCTCCAAAACCCCTATGCCGCAGGTTGCCATAAATTGATTAA
AGACGGTGCAATACTTGTCGATAACATACAAGATATTTTAGAAGCGATCGCTTGGCAATACCAACCACAACAAGGCGAAT
TATTTGAACTAGAAACCAAACAAGCGCTACAAAAACCACAAAATTTTGCAAAAAATATCCCCGAATTGACCGCTTGCCAA
GCCGCTATTTTTGCCCAAATAACACTCAACCCAATTAGCGCTGATGATTTAGCCAAAGCAGTAGAATTGGATATTGCGAG
CGTTTTGGTGGAATTACTTAATTTAGAATTGCTCGGCATTATTAAACAAACCACTGGAGGCTATACGAGAATATGA
ATGCTCGAAAAACTTTTAACGTTATTACAAATCCCCCAGCTTGGCGCGCAAAAAATCAATCGCTTACTCACGGAAATCGA
TTTTGCCACCTTCTGCCAATTTGATAAAACGCAACTGCGCCAAATAGGCTGGAATGAAAAACAAATCCAACGCTGGTTTC
ACCCAGAACAACGTTGGCAGGAAGATGCATTACGCTGGGCAGAACATGCCGATTGCCATATTTTAACGTTATTTGATGAA
AATTATCCTTTCTTACTAAAACAGATTGCAACTGCACCCCCCATCTTATTCGTACACGGTAACATTGAAAGCCTCTCTTT
GCCACAAATTGCCATTGTTGGCAGCCGTAATTACTCACATTACGGCGAATATTGGGCTGGGCATTTTTCTGCGGAATTAG
TCAAACATCATTTTGCAATAACCAGCGGCTTAGCTATTGGGATTGATGGCTTCTGCCATCAACGAACAATTGATGAAGGC
GGCACAACCATCGCGGTATTAGGTTCTGGTTTAAATTGCCTATACCCTGCACGTCATCGTAAGCTTGCTGAAAAAATTGT
TGAAACAGGCGGAGCGCTAGTTTCAGAGTTTTTTCCAAAACAGCCGCCACTTGCTGAAAACTTTCCGCGCCGCAACCGTA
TTATCAGTGGCTTATCGCTCGGTACATTAGTAGTAGAAGCAGCTTTAAATAGTGGCTCACTTATCACTGCACGCTATGCA
CTCGAACAAGGGCGAGAGGTCTTCGCCATTCCCAATACCCTCCAAAACCCCTATGCCGCAGGTTGCCATAAATTGATTAA
AGACGGTGCAATACTTGTCGATAACATACAAGATATTTTAGAAGCGATCGCTTGGCAATACCAACCACAACAAGGCGAAT
TATTTGAACTAGAAACCAAACAAGCGCTACAAAAACCACAAAATTTTGCAAAAAATATCCCCGAATTGACCGCTTGCCAA
GCCGCTATTTTTGCCCAAATAACACTCAACCCAATTAGCGCTGATGATTTAGCCAAAGCAGTAGAATTGGATATTGCGAG
CGTTTTGGTGGAATTACTTAATTTAGAATTGCTCGGCATTATTAAACAAACCACTGGAGGCTATACGAGAATATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Glaesserella parasuis strain SC1401 |
72.703 |
99.73 |
0.725 |
| dprA | Haemophilus influenzae Rd KW20 |
50.448 |
90.296 |
0.456 |
| dprA | Vibrio campbellii strain DS40M4 |
46.175 |
98.652 |
0.456 |
| dprA | Vibrio cholerae strain A1552 |
41.379 |
100 |
0.42 |
| dprA | Legionella pneumophila strain ERS1305867 |
39.362 |
100 |
0.399 |